| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1535 |
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| Symbol | |
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| ID | 5196196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1707051 |
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| End bp | 1707956 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640581083 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001262036 |
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| Protein GI | 148554454 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.418397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00238453 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGGTTCC AGGGCCTTGA CCTCAATCTC TTGGTCGCGT TCGACACGCT GGCCGAGCAT
CGCAGCGTCA GCCTTGCCGC CGAGGCGATG CACCTCAGCC AGTCGGCGAT GAGCGCGGCC
TTGGCGCGGC TGCGCGCTTA TTTTGACGAC GAATTGCTCG TCCCCCGCGG GCGGACGCTG
GTCCTGACAC CCAGGGCCGA GCAACTCGCC CCCGAGGTGC GGGACACCTT GCTGCGCATC
CATGCGACCA TTGCCCATCC TGCGGCCTTC GATCCGATCG AGACGAAGCG GGAGTTCACG
ATCGTCGCGT CGGACTATGT GCAGGCGGTG CTTTTGGAGC CGTTCATGCG GAAGGCCGCG
CACCATGCTC CCGGGATGCG GTTCCGAATC CTCCCCATCT CGCAGCAGGG CATCGATGAG
TTCAAGCGCG GCGTCATCGA CCTGATCATC GTGGCCGACA GTGTCATCCT TCCCGAACAT
CCGTCGCAAA AGCTGTTCGA GGATGAGGCG AAGCTGATAT GTTCGGCGGA CCATCCGACG
ATCGGCGACG AGATCTCGAT GGAGCAGTTC GGCACGGTTG GACATGTCAC GACCTCGCTC
CACCACCACC GTCCGGGATC GCTCTTCGAC CTGATGCTGT TAGAGCGATC GATTGCGAGA
CGGATCGAGA TTCAGGTTCC GGCCTTCTCC ATGATGGCTG GAGCCGTCGT AGGTACGGAA
CGGGTAGCGA TATTGCACGC TCGACTGGCG ACCTCTTACG CCCGGATCCT TCCGATAAAA
TTGCTGTCTC TGCCGTTCGC CCTGCCGCCC ATTCGGGAGG TCATCCAGTG GCATGCCCTT
CGGCAGCGGG ACCGGGGCTT GCAATGGCTG CTTGAGGCGC TGACCAGTGA GGCCGCTGCC
CTGTGA
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| Protein sequence | MRFQGLDLNL LVAFDTLAEH RSVSLAAEAM HLSQSAMSAA LARLRAYFDD ELLVPRGRTL
VLTPRAEQLA PEVRDTLLRI HATIAHPAAF DPIETKREFT IVASDYVQAV LLEPFMRKAA
HHAPGMRFRI LPISQQGIDE FKRGVIDLII VADSVILPEH PSQKLFEDEA KLICSADHPT
IGDEISMEQF GTVGHVTTSL HHHRPGSLFD LMLLERSIAR RIEIQVPAFS MMAGAVVGTE
RVAILHARLA TSYARILPIK LLSLPFALPP IREVIQWHAL RQRDRGLQWL LEALTSEAAA
L
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