| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1530 |
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| Symbol | |
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| ID | 5197340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1699273 |
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| End bp | 1700841 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581078 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001262031 |
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| Protein GI | 148554449 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0910104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC AGTCTGATTA CGGCGAGTTG CGTGATCTTC CGCGCTATCA GGAAAGCGTC
GTCGCCATGT TGCGCGCGAC CGTGCGACGA AACCCGGAAC TGCCGGCACT CCACCAGGGC
CATATCCGTC TGACCTATGG CGAATATCTC GCCGCGGTCG AGCATCTGGC GGACAGCCTG
GGGGCGAAGA CCGAGGGCGC GGTCATCGCC GTGGCGTTGC GCAATTCGAT CGAACTGGCG
ATTGTCAGTT TCGCCGTGCA TTTCTCCGGT GCGGCGCTGT GCTTGATCAA CCCCGACTAT
ATGCCGCAGG AACTGGCGGG CATCCTGGCG GACGCCGCGC CGATAATGAC GATCGGCAAT
GAGGCGTTCC GCGAGAAGCT CGAGGCCTGT GGAACGGACG GCGGAGAGTT CCGCCTGGTC
GTCGAGGGTG AGGGCAGGTT GCGGGTCCCG GTGCCCGCCG AGCCCCCCAT ACTCGGCGCG
ATCGGGCCCG ACATGCTGGC GACGATCCAA TATACGGGCG GCACCAGCGG ACGTCCCAAG
GGGGTCGAAC TCACCCATGG GGCCATCGCC GCGAACATCG CGCAGCGCGA AGCAATGCTC
CCCACGTCGT TCGGAGGTGA GAAGATTCTC TGCTTGATGC CGATGTTCCA TTCCTTCGGC
ACGGCGATGT GCCTGCATCT GGCGGCAGCG TGCGGCGGTG AGCTCGTGAT CATGCCTGCT
TATCGGCCCG CCGATACACT GGCGGCAATC CGCCAGCACG GCATCAATCT CTTTCCGGCT
GGGCCCACCG TGTACACGAG CCTATTGTCG TTCGAGGAAA CCGGGCCCGA CGATCTAGCG
CCGATCACCG CCAGCTATTC CGGTTCGGCG GCCCTGCCTC CCGACGTGCT GCACCGTTGG
GAAGCCCTGG CCGGAAGTCC GATCTTCGAA GGCTATGGAC AGACCGAGGC GGGACCGATC
CTGACCTATA ATTCCCCGTC GTTCGAACGC CGCGCCGGGT CGGTAGGCAA GCCGCTGCCC
TTCACGTCGG TGCGGATCGT CGACGGCGAC GGTCTGCCCT GCGCGCAGGG GACGACCGGG
GAGATATGGG CGAGCGGTCC CCAGATCATG CGCGGCTACC GCAATCTGCC GAACGAGACG
TCGGCCGCTC TCGGCGACGG ATGGCTGCGT ACCGGCGATC TCGGCCATTT CGACGAGGAC
GGCTACTTGT TCATCGATGG CCGCAAGAAG GAAATGGCGA TCATCAAGGG CTACAACGTC
TATCCGGTCG AGGTGGACAA TGTCCTGTTC CAGCACCCGG GCATTCTCGA AGCGGCGACG
GTGGCGACCA AAGACGGCTA TAGGGGCGAG GTGCTCTATG CCTTCGTCGC GCCCAGGCCG
GACGCCTCCC TGACGACCGA CAGCGTCGAA GCCTGGTGTC GCGATCGCCT CGTCCGATAC
AAGGTGCCAT CGATGTTCGT CCTGCTGACG GCGCTCCCGA AGACGGCAAT CGGCAAGATC
GACAAGACGG AACTGGCGCG ATCGGCGGCC CGGATGCACG GCTCCGCCAC TAGCGCCCCC
GCGGCATGA
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| Protein sequence | MMNQSDYGEL RDLPRYQESV VAMLRATVRR NPELPALHQG HIRLTYGEYL AAVEHLADSL
GAKTEGAVIA VALRNSIELA IVSFAVHFSG AALCLINPDY MPQELAGILA DAAPIMTIGN
EAFREKLEAC GTDGGEFRLV VEGEGRLRVP VPAEPPILGA IGPDMLATIQ YTGGTSGRPK
GVELTHGAIA ANIAQREAML PTSFGGEKIL CLMPMFHSFG TAMCLHLAAA CGGELVIMPA
YRPADTLAAI RQHGINLFPA GPTVYTSLLS FEETGPDDLA PITASYSGSA ALPPDVLHRW
EALAGSPIFE GYGQTEAGPI LTYNSPSFER RAGSVGKPLP FTSVRIVDGD GLPCAQGTTG
EIWASGPQIM RGYRNLPNET SAALGDGWLR TGDLGHFDED GYLFIDGRKK EMAIIKGYNV
YPVEVDNVLF QHPGILEAAT VATKDGYRGE VLYAFVAPRP DASLTTDSVE AWCRDRLVRY
KVPSMFVLLT ALPKTAIGKI DKTELARSAA RMHGSATSAP AA
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