| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1502 |
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| Symbol | |
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| ID | 5200863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1660209 |
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| End bp | 1662614 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581049 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001262003 |
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| Protein GI | 148554421 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCG CCCTCGCCCT CGCCAGCATA TCGCTGCTCG TCGTGGCCGC CCCTGCCGGC
GCCGCGGAAA GGGCGGCGCT CGACCTGCCG GCGGGCCGGC TGAGCGACGC GGTGGCGGCG
CTCGCGGCGC AGACCGGGGC CAGCATCAGC GTCACCGACG GATCGATCTG GGCGATGCGC
GTGGCGCCGC TGCGCGGCCG GATGAGCGCG GAGGACGCGC TGCGCCGCCT GTTGCGCGGC
AGCCGCGCCC GGCTCGTCGT GCTCGGCGAC CGGAGCTTCC GCATCGTCGC CGCGCGGGAT
GCCGCCGCGC CGCCCAGGTC CGCCCGCCCC GCGCCCCCCG CCGCGATCGT CGAGGGCGAG
GAGCCGCCGA TCATCGTCAC CGCCTCGAAG CGGGACACGC GGCTGCGCGA CTTCCCCGGA
TCGGTCAGCA TCCTCGACGG CGCCGACCTG ACCTTCGGCG GAGAGCAGGG GATGGAATCG
GTGCTGGCCC GCGTCGCCAG CCTGTCCTCG ACCCATCTCG GCGCCGGCCG CAACAAGCTG
TTCATCCGCG GCATCGCCGA TTCGAGCTTC ACCGGGCCGA CCCAGGCGAC GGTGGGCCAG
TATCTGGGCG ACATGCGGCT GACCTACAAC GCGCCCGATC CCGACCTGCG CCTCTACGAC
ATCCGGTCGG TCGAGATCCT CGAAGGGCCG CAGGGCACGC TCTACGGCGC CGGATCGCTC
GGCGGGATCA TCCGCATCGT CCGCAACCCG CCCCGGCTCG GCCAGTTCGG CGGCGCGCTG
TCGGCGGGCG CCTCGGTCAC CGCGCATGGC GATCCCTCCG GCGATCTCGG CGGCATGCTC
AACCTGCCGG TGATCGGCGA CCGGGTGGCG CTGCGCGCCG TCGCCTACGG GCTGCGCGAG
GGCGGCTATA TCGACGATGT CTGGCGGCAG AAGAAGGACA TCAACCGCAC CCGCATCGCC
GGCGGTCGGG CGACGCTCCG GATCGATGCC GGCGACGGCT GGACCGTCGA CCTCGGCGGC
GTCTACCAGG ACAATGAGGG CCGCGACAGC CAATATGCCG ACCGCAGCCT CGGCGGCCTG
AAGCGGTCGA GCCGGACGCC GGGCGGCTTC GACGGCAATT ACGCGCTGGG CGAACTGGTC
GTCGCCAAGA GCTGGGACGG GCTGTCCTTC CTCTCCTCGA CCGGGCTGGT CCGCCAGAAG
CTGGACGAAC GCTACGACGC CAGCATGAAC GGGGCGGAGC GCCTGTTCAC CCAGCGCAAC
CACACCCGGA TGTTCGCGAC CGAGAACCGG CTGTGGCGAC CGACCCGCGA CGGTTTCGGC
TGGGTGATCG GCGCCAGCTA CACCCACAAC CGCACCGATC TCGACCGGTC GCTGGGCCCG
GTCGGCGTGC CGGTCGCGGT CACCGGCGTG TCGAACCGCA TCCGCGAGAC CACGGTCTAC
GGCGAGGCGA GCGTCGAGCC GGTGCGCGGG CTGACCGTCA CCGGCGGCGC GCGCTACACC
TGGTCGAAGC TGGGCGGCGG CGCCGACGAT CCTCTGCCGG TCTTCCTGCC CAGCCTGGAG
GCGGCGCGCG CGGCGATCGT CGCCAGCCGC AAGGAGAACA GGCTGCTGCC GTCGGCCTCT
GTCTCGGCCG CGCTGCTGCC GCGGCTGATC GTCTATGCGC GCTACCAGCA GGGGTTCCGG
CCCGGCGGCC TGGCGATCGA GGGCGGCTTC GTCCGCCGCT TCCGCAACGA CCATGTCGCG
ACGATGGAGA CGGGCCTGCG CTACGGCGTG CGTGGCGACG ATCCGTTCGA CCTGTCGCTG
AGCCTGTCCT ACACCGACTG GCAGGACATC CAGGCCGACT TCATCGACAG TGGCGGGCTG
CCCACCACCG ACAATATCGG CGACGGCCGC ATCTATTCGC TGAGCGCGGC GCTGGGCTGG
GCGCCGCTGC CCGGCCTGAT CTTCGACGCC GCCGCGACCT ATAACGACAG CCGCGTCACC
GATCCGTCGC CGTCGCTGCT GTTCGCGCTC GCCTCGGCGG CGGTCAGCGA CAAGACCGGC
GCCTTCACCG GCGGGCAGAG CCGCATCCCC AACGTCGCGC GCTTCACCAC GCGGATCGGC
TTCGACTATC GCACCCCGGT CTCCGACGCG CTCGAGCTGC GGCTCAACGG CTGGGTCCGC
TATATCGGCA AGTCGCGGCT CGGCATCGGC CCGATCCTCG GCGACCTCCA GGGCGACTAT
CTCGACACCG CGCTGACCGC GCGGATCGGC CGTCCCGATT TCGGCGTCAG CCTGGGCGTC
ACCAACCTGA CCGACGCGAT CGGCAACCGC TTCGCGCTGG GCACCCCCTT CCAGGCCTCG
GGCGGCCGGC AGATCACCCC GCTGCGCCCG CGCACCATCC GCATCGGCCT CGACAAGAGC
TTCTGA
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| Protein sequence | MKRALALASI SLLVVAAPAG AAERAALDLP AGRLSDAVAA LAAQTGASIS VTDGSIWAMR
VAPLRGRMSA EDALRRLLRG SRARLVVLGD RSFRIVAARD AAAPPRSARP APPAAIVEGE
EPPIIVTASK RDTRLRDFPG SVSILDGADL TFGGEQGMES VLARVASLSS THLGAGRNKL
FIRGIADSSF TGPTQATVGQ YLGDMRLTYN APDPDLRLYD IRSVEILEGP QGTLYGAGSL
GGIIRIVRNP PRLGQFGGAL SAGASVTAHG DPSGDLGGML NLPVIGDRVA LRAVAYGLRE
GGYIDDVWRQ KKDINRTRIA GGRATLRIDA GDGWTVDLGG VYQDNEGRDS QYADRSLGGL
KRSSRTPGGF DGNYALGELV VAKSWDGLSF LSSTGLVRQK LDERYDASMN GAERLFTQRN
HTRMFATENR LWRPTRDGFG WVIGASYTHN RTDLDRSLGP VGVPVAVTGV SNRIRETTVY
GEASVEPVRG LTVTGGARYT WSKLGGGADD PLPVFLPSLE AARAAIVASR KENRLLPSAS
VSAALLPRLI VYARYQQGFR PGGLAIEGGF VRRFRNDHVA TMETGLRYGV RGDDPFDLSL
SLSYTDWQDI QADFIDSGGL PTTDNIGDGR IYSLSAALGW APLPGLIFDA AATYNDSRVT
DPSPSLLFAL ASAAVSDKTG AFTGGQSRIP NVARFTTRIG FDYRTPVSDA LELRLNGWVR
YIGKSRLGIG PILGDLQGDY LDTALTARIG RPDFGVSLGV TNLTDAIGNR FALGTPFQAS
GGRQITPLRP RTIRIGLDKS F
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