Gene Swit_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1498 
Symbol 
ID5200859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1656006 
End bp1657001 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content70% 
IMG OID640581045 
ProductMg2+ transporter protein, CorA family protein 
Protein accessionYP_001261999 
Protein GI148554417 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACGA ACAGCGATCC ATTGCCGATC ACGCCGTTCC CGGCGGCGCC GGGGCTGATC 
TGGGGGTTCG ACCTCGACGC GGCCGGCGCG CACCCGACGG AGCGGTGCGA GGAGAAGGGC
GGTGGCTTCC GCTGGCTGCA CCTCAGCCTG GCGCATCAGG GGACGGCGAG CTGGATCAAC
CGGCTGGAGA CGCTGCCCGA GGACGTCAAG GAACTGTTGC TGGCCGGCGA CAACCACCAG
CGCGCGCTGG TCGACGAGGG CGTGGTCGGT TGCGTGCTCC ACGATTTCGA GCGCGATTTC
GAGCAGCGCA GCACCCAGGT CGGCGCGATC CGGATGGCGC TGACCCCGGT GATGATGATC
ACCGCGCGGC TCCACCCGAT CCGTTCGGCC GACAATGTCC GCAACCGGCT GACGCATGGC
CGCCGCATCG AGGAGCCGAG CGATGCGCTC GACCTGCTCG TCACCACCAT CGCCGAGGGG
CTGTCCGCCG AGGTCCGCGA CCTGAGCGGC GAGGTGCAGC GCGCCGAGGA CGGCTTCCTC
AACGACGTCA ACGCGCCGAC CGCGCGGAGC CTGATCGCGA TCCGGCGGCG GCTCGCCCAG
CTCCACCGGA TGCTCGCCGG GATGAGCACG GTGTTCCGGC GCCTCGAAGA GGACGAGGAG
CTTCCCGAGG CGCTGCTCGC CACCGTCGAG AAGCTGTCGC AGCGGCTCCA GTCGCTCGAC
GCCGACGTCG AGGGCGTCCA GCGCCAGCTC CGCCAGCTCC GCGAGGAGAT CGAGACCCAG
GTCGACCAGC GCACCAACCA GAATCTCTAC ATCCTGTCGA TCATGACCGC CCTGTTGCTG
CCGGCGACCT TCGTCACCGG CCTGTTCGGC ATGAACACCG GCGGCCTGCC CTGGGCGCAG
ACGTCGCACG GCACCTTCCT CGCCACCCTG CTCGCCTGCG CCGCGGCGGG CGCGACCTAT
CTGCTGCTCC GCTGGATGGG GTTCATGCGC CGGTAG
 
Protein sequence
MPTNSDPLPI TPFPAAPGLI WGFDLDAAGA HPTERCEEKG GGFRWLHLSL AHQGTASWIN 
RLETLPEDVK ELLLAGDNHQ RALVDEGVVG CVLHDFERDF EQRSTQVGAI RMALTPVMMI
TARLHPIRSA DNVRNRLTHG RRIEEPSDAL DLLVTTIAEG LSAEVRDLSG EVQRAEDGFL
NDVNAPTARS LIAIRRRLAQ LHRMLAGMST VFRRLEEDEE LPEALLATVE KLSQRLQSLD
ADVEGVQRQL RQLREEIETQ VDQRTNQNLY ILSIMTALLL PATFVTGLFG MNTGGLPWAQ
TSHGTFLATL LACAAAGATY LLLRWMGFMR R