Gene Swit_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1495 
Symbol 
ID5200200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1651414 
End bp1652619 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content72% 
IMG OID640581042 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001261996 
Protein GI148554414 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTG AGTGGTGGGC GCGCGACGAC CTGCACCGCG ACGCCGCCGG CCGGCTGATC 
TTCGCGGGCG CCGACGTCGA GACCCTCGCC CGCGCGCATG ACGGCCCGCT GTTCGTCTAC
GGCGCCGGCC GCGTCCGCGC CAATCTGAAC CGGCTGCGCG GCGCGCTGGG GGCGAGCGGC
TGCGCGCACC GCATCTACTA TGCGATGAAG TGCAACCGCT TCGCGCCGCT GCTGGAGATG
CTGGCGGCGG ACGGCGCGGT CGGCGTCGAC ATCTGCTCGC CCGACGAGCT CGACCTCGCC
CTGGCCTGCG GCTTCCGCGC GGGCGACATC AGCTTCACCG GCACCAGCGT CGCCGACCGC
GACCTCGACC GGCTGCTCGT CCACGACGAT CTCCACATCA ACTGCGACTC GCTCGGCCAG
ATCCGCCGGA TCGGCGAGCG CCGGCCGGGC CGCGCGATCG GCATCCGCAT CAATCCCGGC
TTCGGCACCG GCTATGGCGA TTCCGCGCGG CTCACCTATG CCGGCGCGCG CACCACCAAG
TTCGGCATCT ATCGCGAGCA ATGGGCCGAG GCGCTCGGCC TCGCCGCGCG CCACGATCTC
CGCATCACCG CGATCCATTT CCATGTCGGT TGCGGCTATC TGTCGGGCCA GCTCGACGCC
TGGGACCGGG CGGTCGGCGC GGCGGCGGAT TTCCTCGCCG ATCTTCCGGA AGCGACGACG
GTCAACATCG GCGGCGGCCT CGGCCTGCCC CACCGCGCCG GCGACGCGCC GCTCGACCTC
GCCCGCTGGT CGTCGATCGT CGCCCGCCAT TTCGGCGGCC GCGGGCTGAC GGTCGCGATC
GAGCCGGGCG ACTATCTGGT CAAGGACGCG GGGCTGCTGC TGCTGTCGGT GGTCGGGGTC
GAACGCAAGC GCGACACGCT GTTCGTGGCG GTCGACGGCG GGTTCAACCT CCACCCCGAA
CCCGCGCATT ACGACCTGCC GTGCGAGCCG GTCGCCTGCG TCCTGCGCGA GCCGGACCCG
GCGCGCTGGC AGCCGGTCAG CGTCGCCGGC AACATCAACG AGGCGCTCGA CCTGTGGGCG
GAGGATCATC CGATGCCGCC GCTGGAGGAA GGCGACCATG TCGCGCTGAT CAATGCCGGC
GGCTATGGTT CGGCGATGAG CTCGAACCAC TGCATGCGCG GGGCGTTCAC CGAGCTACTG
GTGTAG
 
Protein sequence
MPAEWWARDD LHRDAAGRLI FAGADVETLA RAHDGPLFVY GAGRVRANLN RLRGALGASG 
CAHRIYYAMK CNRFAPLLEM LAADGAVGVD ICSPDELDLA LACGFRAGDI SFTGTSVADR
DLDRLLVHDD LHINCDSLGQ IRRIGERRPG RAIGIRINPG FGTGYGDSAR LTYAGARTTK
FGIYREQWAE ALGLAARHDL RITAIHFHVG CGYLSGQLDA WDRAVGAAAD FLADLPEATT
VNIGGGLGLP HRAGDAPLDL ARWSSIVARH FGGRGLTVAI EPGDYLVKDA GLLLLSVVGV
ERKRDTLFVA VDGGFNLHPE PAHYDLPCEP VACVLREPDP ARWQPVSVAG NINEALDLWA
EDHPMPPLEE GDHVALINAG GYGSAMSSNH CMRGAFTELL V