| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1484 |
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| Symbol | |
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| ID | 5200025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1637265 |
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| End bp | 1639598 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581031 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261985 |
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| Protein GI | 148554403 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.828493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGAA AATCCGCTTT CGCGCTGGCG CTTGCCACCT GCTTCACGTT TTCCGCACAA
GCGAAGGCGG CGGATGTGCC GCCCGCGGAG GCGGACAGCG GCGACCTTGA AGGCATCATC
GTCATCGGCC GCGGCGAGAC CCGCTCGGTC TCGACCCTCG TACCGTCGAA CCTCGACGTG
CTGCCGCCCG GTACCAGCGT GCAGAAGGCG TTGAACTTCC TGCCGGGCGT CAGCGCGCAG
TCGATCGACG CGCTGGGCGT CAACGAACAG TCGCTGTCCC TCCAGGTGCG CGGCTTCAAC
ACCACGCACC TCGGCTACAC GCTCGACGGG ATGCCGCTCG GCGACGGCGC CTACAACAAC
TATAACGGCC TCACCATCAG CCGCGCGCTG ATCTCGGAAA ATCTCGGTCG CGCCGATCTC
GCGACGGGCA TCGCCGGCCT CGGCATCCCC TCGACCAGCA ACCTCGGCGG CGCGTTGACC
TATTTCAGCA GCGACCCGGG CAAGGAGCTG GGCCTCAAGG TCAACGGCAC CATCGGCAGC
GAGAGCAGCA AGCGCGTCTT CGCGCGCCTC GACACCGGCG AGCATGGCGG CTTCTCGGCC
TATCTCTCCG GACAGTACAG CGAACAGGAT CTGTTCGTGA ACCAGGGCGC CTACAAGAAG
TCCACCGGCA AGCAGTTCAA CGCGAAGGCG CAATACGAAT TCGAAGGCGG CAAGATCACC
GCCTTCGCCG ATCTCTCGCG CACCAACCAG GCCGACGACA CCTATCTGTC GAAGGACATG
CTCGGCCGCC TCGGCTGGGA TTGGGCCGGC TATGCGCCGG ACTGGCAGTC CTATCTCGGC
GTCGCCGCTT GTTCCGTGAA GGTCCCGTCG GTCGCCTGCG CCGCCGCGCC GGCACCGCAG
AAGAACGCCG ACGTCACCTT CACCAACGGC CAGATCCTGC GCAACGACGA CCTGTTCTAC
CTCGCCGGGG ATTTCGACCT CACCGAGTCC ATCAAGCTGC ACGTTCAGGG CTATCACCAC
GAGGACAAGG GCGCCGGCAA CAATTTCATC ACCGGCCTGT CCAACCAGGG CACGGCGTCC
ACCGCCGACG ATCTTCCGGT CCAGATCCGC GACACGCGCT ACACGATCGA TCGCACGGGC
GGGCTCGGAA GCCTGAGCTG GACCGTCGGC TTCAACCAGT TCCAGGCAGG CTTCTGGCTG
GAGGAGAACA CCAGCAGCGC CGCTCGCTAC ATCCGAACCG ACGTCACCGG GCCGTTCAGC
CTGGCGAAGT TCCTGAAGGG CCAGCCGTCC ACCGCCCAGT GGGTCCAGGA GACCAAGTGG
AAGACGCGGC AATTCTACCT TCAGGACACG GTCGCGCTGT TCGATGATGC GCTGAGCGTC
GAATTCGGTT TCAAGGGCAC CTATTCGAAG TCGGATGCCC GGGCGATCGA CGGCATCGCC
GCGACGCCGC CGCCGGCCTC CAGCCAGTTC GCGACCGGCA CGCTGGTGGC CAAGGACTAT
TTCCTGCCGC AGGCCGGCCT GCGCTGGAAG ATCGCGCCCG AGCACGAGGT CTATGCCAGC
TATTCCGAGA ACATGGCGAT GTACCAGGGC GGCTTCAAGC TCGGCCCGCA GTCGGTGTCG
CAGGCGGTCT GGGACCTGCA AGGCAAGACG CTGAAGCCCG AGACCTCGAA GAGCTTCGAC
GGCGGCTATC GCTATGTGAG CGGCCCGTTG CAGGTTTCGC TGGCCGCCTA TTGGGTGAAG
TTCGACAACC GCCTGCTGCA GTACAATCCC TGCCCGACCA ACCAGCAGCA GAACCCGGGT
TGCGGCAATT CCTTCCACAA CGCCGGCAGC GTCACGAGCA GGGGCGTGGA ACTCGGGGTG
CTGTGGAACC CGCTGCCGTG GCTGAGCTGG TACAACTCGG CCTCGTACAA CAAGTCCACC
TATGACGACG ACCTCAACTT CTGCACGGCC ACCTGCGTGC TCAAGGCCAC GGCCGGCAAG
CAGCAGGTCG ACACGCCGAA GAAGATGGCC GCGAGCACGC TGAGCCTCAA ATATGCCGGC
TTCTCCGCCT CGGTGCAGGG CAAATATACC GGCCGCCGCT ATTACACCTA CACAAACGAC
CAGAGCTTCG GCGGCTATGT CACCGTCGAC CTCGGCCTTG GCTATAGCTT TGGCGACGTC
GGCCCGCTGA AGGGCGCGAA GCTGTCGCTG AACGTCACCA ACCTGACCAA CAAGCGCTAC
GCGTCGAACT TCGACAGCAG CGTGTTCGCG CCGGATGACG CGGCGGGCAC CATCCTGGTG
TTCCACTCGT CGGCGCCGCG GCAGGTCTTC GGAACGATCG GCTTTGATTT CTAA
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| Protein sequence | MLRKSAFALA LATCFTFSAQ AKAADVPPAE ADSGDLEGII VIGRGETRSV STLVPSNLDV
LPPGTSVQKA LNFLPGVSAQ SIDALGVNEQ SLSLQVRGFN TTHLGYTLDG MPLGDGAYNN
YNGLTISRAL ISENLGRADL ATGIAGLGIP STSNLGGALT YFSSDPGKEL GLKVNGTIGS
ESSKRVFARL DTGEHGGFSA YLSGQYSEQD LFVNQGAYKK STGKQFNAKA QYEFEGGKIT
AFADLSRTNQ ADDTYLSKDM LGRLGWDWAG YAPDWQSYLG VAACSVKVPS VACAAAPAPQ
KNADVTFTNG QILRNDDLFY LAGDFDLTES IKLHVQGYHH EDKGAGNNFI TGLSNQGTAS
TADDLPVQIR DTRYTIDRTG GLGSLSWTVG FNQFQAGFWL EENTSSAARY IRTDVTGPFS
LAKFLKGQPS TAQWVQETKW KTRQFYLQDT VALFDDALSV EFGFKGTYSK SDARAIDGIA
ATPPPASSQF ATGTLVAKDY FLPQAGLRWK IAPEHEVYAS YSENMAMYQG GFKLGPQSVS
QAVWDLQGKT LKPETSKSFD GGYRYVSGPL QVSLAAYWVK FDNRLLQYNP CPTNQQQNPG
CGNSFHNAGS VTSRGVELGV LWNPLPWLSW YNSASYNKST YDDDLNFCTA TCVLKATAGK
QQVDTPKKMA ASTLSLKYAG FSASVQGKYT GRRYYTYTND QSFGGYVTVD LGLGYSFGDV
GPLKGAKLSL NVTNLTNKRY ASNFDSSVFA PDDAAGTILV FHSSAPRQVF GTIGFDF
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