Gene Swit_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1462 
Symbol 
ID5196767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1610440 
End bp1610916 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content70% 
IMG OID640581010 
Producttranscriptional regulator 
Protein accessionYP_001261964 
Protein GI148554382 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.177861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG CGCATGATCA CCGGCTCCAC GAGGGCCAGT CGCTGGCCGA TGCCGCGCAG 
CGCGCCTTCG AGCGCGCGGG CGAGCAGTGG ACGCCGATGC GGGCCGAGAT CTTCGCCGCG
CTGAGCGCCG CGACCAAGCC CGCTTCCGCC TACGACCTGG CCGAGGCGGT GTCCGGATCG
ACCGGCCGGC GGGTCGCCGC CAACAGCGTC TATCGCATCC TCGACGTGTT CGTGGCGGCC
AATCTGGCGC GGCGGGTGGA AAGCGCCAAC GCCTATATCG TCAACGCCCA TCCCGAGTGC
CAGCATGACT GCATCTTCCT GGTCTGCGAC AGCTGCGGGC AGGCCAGCCA TGTCGACGAC
GACGCGCTGA CCGGATCGGT TCGGCGCGCG GCGGAGAAGG CCGGCTTCAC CAATCTCCGC
CCGGTGATCG AGGTGCGCGG ATGCTGCGCG CAATGTTCGG AAGGCGACGC GGCCTGA
 
Protein sequence
MATAHDHRLH EGQSLADAAQ RAFERAGEQW TPMRAEIFAA LSAATKPASA YDLAEAVSGS 
TGRRVAANSV YRILDVFVAA NLARRVESAN AYIVNAHPEC QHDCIFLVCD SCGQASHVDD
DALTGSVRRA AEKAGFTNLR PVIEVRGCCA QCSEGDAA