| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1441 |
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| Symbol | |
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| ID | 5199649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1585815 |
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| End bp | 1587941 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580988 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001261943 |
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| Protein GI | 148554361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0121309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC GTCACGGCTC CATCCCGGCC GCGCGGCGGG CTGCGCCGGC GGTCCTTCCC
GCCCTGTGCG TGATCGCCGC CGGGGCGATC ATGGCCGTCG CGCCGGCCGG CCGGGCGCGG
GCGTCCGACG CGCCCGGGCC GCGATCGGCC TATGCGGTCC ATTGCGCCGC CTGCCATGGC
CAGGACTTCC AGGGCGGTTT CGGCCCGGCG CTGAAGGGCG CGTCCTTCGT CGCGAAATGG
GCGCCGCGGA TGGACCGGCT CGCCGTCCAC ATAAGCGAGA CCATGCCGCC CAGCGATCCC
GGCTCGCTGC CGCCGGACGC CTATGCCGGG ATCGTCGCGG CGATCGCCCG CGCCAATGAC
CTCGATCCGG CGGGCGGTGC GAAGGCCGGC GCCGCGAAGG CCGCCGATGC CAGTGCGACC
GAGGTTCGCA ACCTCGACCA GCCCGAGCCG AATTACGATC GCTATTATGA GCAGGTGGTC
CGGCAGCGCC GCGAGACGCT GGCCGCGCTG CGGACGGTGT CCGACGCCGA TCTCCGCGCG
CCCGCGCCCG GCGACTGGCT GCACTGGCGC CGCAGCTATG ACGGCGCCGG CGCAAGCCTG
TTGACGCAGA TCACCGCCGC CAACGCATCC CAGCTCGAGG TCGCCTGGAG CCTGGCGTTG
CCGAACGGCA CCAACGGCAT CACCCCGCTG GTCCATGACG GGGTGATGTT CGTCAACAGC
TCCGGCACCG TCCTCGCGAT CGACGCCGCC AGCGGCGATC CGTTGTGGAC CTTCAGCCGC
CCGTCGCCGC CCGGCCTGCC GATCAGCCAG CCGCGCAGCA TGGCGATCTA TGGCGACAGG
CTCTACGTGC CGACCTCCGA CAACCACATG CTCGCGCTCG ACATGCGATC GGGCAAGCTG
CTGTGGGACC ATCTGATCGC CAGCAGCAGC GGCACGCTGA TGATCAGCGC GGGGCCGCTG
GCGGTGCGCG GCAAGATCAT CCAGGGCATG GCCGGCTGCG CGGGCGTCGG CGAGCCGAAG
GGCTGCTTCG TCGTCGCGCT CGATGCGGAG ACCGGCAAGG AGCTGTGGCG CTTCGACACG
ATAGCGACCG GCGAGCCCGA CAGTTGGAAC GGTGCCCCGC GCGCCGAGCG GTTCGGCGCG
TCGATCTGGG CCACCGCCAC CTATGATGCG GAGGACGACC TGATCCTGAT CGGGACCGGC
CAGACCTATC ATATCGCCCC GCTGATGCGG AAACCGGCCC GCGCGGGCAC GACCAACGAC
GCGCTCTACA CCAATTCGAC GCTCGCCTTC GATCCCGACA CGGGCCGGCT CGTCTGGTTC
TACCAGCACA TGCCGCGCGA GGTGTGGGAC TTCGACTGGG CGTTCGAGCG GCAGGTCATC
CCGCTGCGCA CCCGGACCGG CGAGCGGCGC GTGGTGGCGA CGATCGGCAA GATCGGAATC
CTCGACCTGC TCGACGCGAA GACCGGCGCC TATGTCGGAT CGGTCGACAT GGGTTTCCAG
AATCTGGTCA AGGCGATCGA TCCCCGCACC GGCCGGAAGA TCACCGATCC GGCGCTCGAT
CCCGATCCGG ACCGGTCCAG GTTCATCTGC CCCTTCGCCA CCGGGGTCAG GAACTGGCCG
TCGACCGCCT ATGATCCCGG CCGCAGGCTG ATCTACGTGC CCTTCACCCT GTCGTGCATG
CACTATTCCT GGCGGAAGGG CGAAGGCTTC GACATCGCGT TCGGGATGAC GCCGCCCCGC
GCCGACGACG GCAATCTGGG CGGCCTCGCC GCGATCGACC CCGACGGCAT GAAGGTGAAA
TGGGTCCGCC GCCAGCGCGC GCCGTCGGCG GGCTCGGTGC TGGCGACGGC GGGCGGCATT
GTCGCCTATG GTGCGCGCGA TCGTATTTTC CGGGTGGTCG ACGGCCGCTC GGGCGACACG
CTCTGGGCGC TGAAGCTCGA CCAGGTGCCG AGCGCGAGCC CGATCAGCTT CATGGCCGGG
GGCGTCCAGT ATCTCGCCGT CACCACCGGC GGCGGTAGCC CGAACGACGT CACCGCCCGC
GCGCTCACCC CGGAGATCGA CGCGCCCGCG GGCGGGGTGC GGCTGTGGGC GTTCAGGCTC
AAATCCGACC GGAGATCGCC CCGATGA
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| Protein sequence | MSVRHGSIPA ARRAAPAVLP ALCVIAAGAI MAVAPAGRAR ASDAPGPRSA YAVHCAACHG
QDFQGGFGPA LKGASFVAKW APRMDRLAVH ISETMPPSDP GSLPPDAYAG IVAAIARAND
LDPAGGAKAG AAKAADASAT EVRNLDQPEP NYDRYYEQVV RQRRETLAAL RTVSDADLRA
PAPGDWLHWR RSYDGAGASL LTQITAANAS QLEVAWSLAL PNGTNGITPL VHDGVMFVNS
SGTVLAIDAA SGDPLWTFSR PSPPGLPISQ PRSMAIYGDR LYVPTSDNHM LALDMRSGKL
LWDHLIASSS GTLMISAGPL AVRGKIIQGM AGCAGVGEPK GCFVVALDAE TGKELWRFDT
IATGEPDSWN GAPRAERFGA SIWATATYDA EDDLILIGTG QTYHIAPLMR KPARAGTTND
ALYTNSTLAF DPDTGRLVWF YQHMPREVWD FDWAFERQVI PLRTRTGERR VVATIGKIGI
LDLLDAKTGA YVGSVDMGFQ NLVKAIDPRT GRKITDPALD PDPDRSRFIC PFATGVRNWP
STAYDPGRRL IYVPFTLSCM HYSWRKGEGF DIAFGMTPPR ADDGNLGGLA AIDPDGMKVK
WVRRQRAPSA GSVLATAGGI VAYGARDRIF RVVDGRSGDT LWALKLDQVP SASPISFMAG
GVQYLAVTTG GGSPNDVTAR ALTPEIDAPA GGVRLWAFRL KSDRRSPR
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