| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1430 |
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| Symbol | |
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| ID | 5198226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1570479 |
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| End bp | 1571258 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640580977 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001261932 |
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| Protein GI | 148554350 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00776927 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGATC GGAAAGAGTG TGGAATCATG ACGCAGGACA TCGCCGATCT GGGAGCCCGA
TTGCGGGCCA TTCGCAAATC CAACAACTGG AAGATATCCG ACGTCTCGCG GATGACGGGA
TTGGCGATTT CCACGATTTC GAAGGTGGAA AACGGCCATA TGTCGCTGAC CTACGACAAG
CTGATGCAAG TCGTGAAAGG ACTGTCGATC GATCTCGTCG ATATCTTTTC GAATCCGGCT
ATGTCCGAGG CGCCTGCCCG GGCGATGGTC ACCGCCCGCA GGAGCGTCGG ACGAGAGGAC
AATTCCTACG AAATCGACGC TCGTTTCTAT AACTACCGCT ATCTCAATAC CGATCTCGCC
CAGAAGGCGA TCATTCCCAT TCTCGGTGAA ACGACCGCGA AGTCGATCGA GGAATTCGGA
GATATGATCC GCCACGAGGG CGAGGAATTC CTCTACGTCC TCGAGGGAAA CCTCCTCGTC
TACACGGAGT TTTACAACCC CGTCCGGCTG ACCGTCGGCG AATCGCTCTA TATCGATAGC
ACGATGGGGC ACGCCTATAT CGCGGTCGAT TGCGAGAAGG CCAAATTCCT CTGCGCCTGC
ACCAAGGATG ATCGGTCGCT GCTGATCGAA AAGGCGCAGT CGGAGGAAGG CGACACTCCC
ATGGGCAATG ATCGCGCGCA TGCACCCGCC GTGAAGGGCG GCCGGCGGAT CGGAAATGGC
GGAACCCGCA AGACTTCCGG TGCTGCCGGT CCCAGGCGTC GGTCGATTGG CAAGGGTTGA
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| Protein sequence | MPDRKECGIM TQDIADLGAR LRAIRKSNNW KISDVSRMTG LAISTISKVE NGHMSLTYDK
LMQVVKGLSI DLVDIFSNPA MSEAPARAMV TARRSVGRED NSYEIDARFY NYRYLNTDLA
QKAIIPILGE TTAKSIEEFG DMIRHEGEEF LYVLEGNLLV YTEFYNPVRL TVGESLYIDS
TMGHAYIAVD CEKAKFLCAC TKDDRSLLIE KAQSEEGDTP MGNDRAHAPA VKGGRRIGNG
GTRKTSGAAG PRRRSIGKG
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