| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1397 |
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| Symbol | |
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| ID | 5198096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1540597 |
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| End bp | 1541046 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580943 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001261899 |
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| Protein GI | 148554317 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.806848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.241303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATCG CCCTTCACCA GCCCGATATT GCCGGAAATG TGGGCACGAT CCTGCGCATG
GCCGCCTGCT TCGGCGTTCC CGTCGACATC ATCGAGCCGT GCGGCTTCCC CTTTTCCGAG
CGTGGCCTGC GCCGCGCGGG CATGGACTAT GCCGAGGCCG CCGAGATCAG TCGCCACGCC
GACTGGGCCG CGTTCGAATC CCGCGCGGCG GGCCGGATCG TGCTGCTTAC CACCGCCGCC
GATTTGACCT TGGACAAGGC CGGCTTCCTG CCCGACGACA TAGTGCTGCT CGGATCGGAA
GGCGCCGGCG TGCCGCGCCC GGTGCATGAC CGGGCCGACC TGCGCGTGCG CATTCCGATG
CGGCCGGGCT TCCGGTCCTT GAATGTGGCG GTCTCGGCTG GCATCGCGCT CGCCGAGGCG
CTGAGGCAGA CCGGAGGATG GCCCCAATGA
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| Protein sequence | MRIALHQPDI AGNVGTILRM AACFGVPVDI IEPCGFPFSE RGLRRAGMDY AEAAEISRHA
DWAAFESRAA GRIVLLTTAA DLTLDKAGFL PDDIVLLGSE GAGVPRPVHD RADLRVRIPM
RPGFRSLNVA VSAGIALAEA LRQTGGWPQ
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