| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1378 |
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| Symbol | |
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| ID | 5198825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1520763 |
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| End bp | 1521332 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580924 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_001261880 |
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| Protein GI | 148554298 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0495277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGATCT GGGTCGGCCT TGGCAATCCG GGCGCGCAAT ATGCGATGCA CCGGCACAAT
GTGGGTTTCA TGGCGGTCGA CACGATCGCC GAGGTGCACC GCTTCGATCC GTGGAAGAAG
CAGTTCCAGG GCTGGTCGGC GACCGGGCGG ATCGGCAACG TGAAGGTCCT GCTGCTCAAG
CCCGCCACCT TCATGAACGA AAGCGGCCGA TCGGTCGGCG AGGCGATGCG CTTCTTCAAG
CGCGAGACCG GCGACGTCAC CGTCTTCCAT GACGAACTCG ACCTCGCCCC GTTCAAGGTG
AAGGTGAAGA CCGGCGGCGG CACCGCCGGA CATAACGGCC TGCGATCGAC CGAGGCGCAT
ATCGGCAACG CGTTCCGCCG CGTCCGCATC GGCATCGGCC ATCCGGGACA CAAGGACCGG
GTCACGGGTT ATGTCCTCGG CAATTATGTC AAGGCGGAGC TCGATCCGCT CGCCGGCATG
CTGGGCGCGA TCGCGTCGGA GGCGGACTGG CTGGCATCGG GCGACGATGC CCGCTTCATG
AGCGAGATCG CGTTGCGGCT CGCCGACTGA
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| Protein sequence | MQIWVGLGNP GAQYAMHRHN VGFMAVDTIA EVHRFDPWKK QFQGWSATGR IGNVKVLLLK
PATFMNESGR SVGEAMRFFK RETGDVTVFH DELDLAPFKV KVKTGGGTAG HNGLRSTEAH
IGNAFRRVRI GIGHPGHKDR VTGYVLGNYV KAELDPLAGM LGAIASEADW LASGDDARFM
SEIALRLAD
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