| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1374 |
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| Symbol | |
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| ID | 5200676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1517323 |
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| End bp | 1518153 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580920 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261876 |
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| Protein GI | 148554294 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.155315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA CCATCCTCAT CACCGGAACC TCGTCGGGCT ATGGCAAGGC GACCGTCGAC
CATTTCCTCG ATCGCGGCTG GAACGTGATC GCGACCATGC GGCGGCCCGA CCCGGCTGTC
TTCCGGGCAT CGGACCGGCT GAAGCTGGTC CGGCTCGACG TCACCGACCG GGCGAGCATC
GACACGGCGA TCGCCGAGGG GGTGGCGGCT TTCGGGGCGA TCGACGTGCT GGTGAACAAT
GCCGGGATCG GCATGGCCTC CGCCGTCGAA GCCACCCCCG ACAGCACGGT CCGCGAGGTC
TTCGAGACAA ACTGCTTCGG CGTCATGGCC ACCTGCCGCG CGATCATCCC GCAGATGCGG
CGGCAGGGGC ACGGCATTAT CGTCAACGTC ACGTCAAGCG TGACCATCGG GGTCATGCCG
CTCGTCGCCG TCTACGCCGC GAGCAAGTTC GCCGTGGAGG GTTTCACCGA GTCCCTGGCC
TATGAGCTCG CGCCGTTCGG TATCACCGCC CGGCTGGTCG AGCCGGGCTA TGCCCCGACC
ACCAGCTTCA CCGCCAATGG CGGTGCCCGG ATGGAGGGGC TGATCCCGGC CGATTATGCG
CCCTTCGCCC AGGCCTGCTT CACCCGCATG GCGGACTATC CCACCGCCTA TTGCAGTGAA
GCCGAGGTGG CCGAGGCCGT CTTCGCCGCG GCGACCGAGG AGGGCGGCAA GCTGCGCTAT
CCGGCGGGGG CCGACAGCAA GATGCTCAAC GAGCTGCGCT GGTCGACCTC GGAAGAGGAG
TATCTGGCGC GGATGCGGGC GATGTTCGCG CCACGACCCG ATCCGTCCTA G
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| Protein sequence | MTSTILITGT SSGYGKATVD HFLDRGWNVI ATMRRPDPAV FRASDRLKLV RLDVTDRASI
DTAIAEGVAA FGAIDVLVNN AGIGMASAVE ATPDSTVREV FETNCFGVMA TCRAIIPQMR
RQGHGIIVNV TSSVTIGVMP LVAVYAASKF AVEGFTESLA YELAPFGITA RLVEPGYAPT
TSFTANGGAR MEGLIPADYA PFAQACFTRM ADYPTAYCSE AEVAEAVFAA ATEEGGKLRY
PAGADSKMLN ELRWSTSEEE YLARMRAMFA PRPDPS
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