Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1355 |
Symbol | |
ID | 5200528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1501768 |
End bp | 1502958 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640580902 |
Product | elongation factor Tu |
Protein accession | YP_001261858 |
Protein GI | 148554276 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.358693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0503589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGG CTAAGTTTGA GCGGACCAAG CCGCACTGCA ATATTGGCAC CATCGGCCAC GTCGACCATG GCAAGACGTC GCTCACGGCA GCCATCACCA AGGTCCTCGC CGAGACCGGC GGCGCGACCT TCGTCGACTA TGCCAACATC GACAAGGCTC CCGAGGAGCG CGAGCGCGGC ATCACCATCT CGACCGCGCA CGTCGAGTAT GAGACCGAGC AGCGCCACTA TGCGCACGTC GATTGCCCGG GCCACGCCGA CTATGTGAAG AACATGATCA CCGGCGCCGC GCAGATGGAC GGGGGCATCC TCGTCGTCTC GGCCACCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC CTGCTCGCCC GTCAGGTCGG CGTTCCGGCG CTCGTCGTGT TCATGAACAA GGTCGACCTC GTCGACGACG CCGAGATCCT GGAGCTCGTC GAGCTCGAGG TTCGCGAGCT GCTCTCGTCC TACGAGTTCC CGGGCGACGA CATCCCCGTC ATCAAGGGTT CGGCCGTCAA GGCGCTCGAC GGCACCAACG ACGAGATCGG CCGCAACGCC GTCCTCGAGC TGATGGCCGC TGTCGACTCG TACATCCCGC AGCCCGAGCG TCCGCTCGAC AAGCCGTTCC TGATGCCGAT CGAAGACGTG TTCTCGATCT CGGGCCGCGG CACCGTCGTC ACCGGCCGCG TCGAGACCGG CATGGTCAAG GTCGGCGAGG AAGTCGAGAT CGTCGGCATC AAGGACACCC GCAAGACCAC CGTCACGGGC GTCGAGATGT TCCGCAAGCT GCTCGACCAG GGCCAGGCCG GCGACAACAT CGGCGCGCTG ATCCGCGGCG TCGGCCGTGA GGAAGTCGAG CGTGGCCAGG TTCTCGCCAA GCCGGGTTCG ATCAAGCCGC ACACCGACTT CTCGTCGGAA GTCTACGTGC TGTCGAAGGA AGAGGGTGGC CGTCACACGC CGTTCTTCGC CAACTATCGT CCGCAGTTCT ACTTCCGCAC CACGGACGTC ACCGGCACCG TCGAGCTGCC CGAGGGCACC GAGATGGTCA TGCCCGGCGA CAACGTGAAG CTCGGCGTCA AGCTCATCGC CCCGATCGCC ATGGAAGAGG GCCTGCGCTT CTCGATCCGT GAAGGCGGCC GCACCGTCGG CGCCGGGGTT GTCAGCTCGA TCTCGAAGTA A
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Protein sequence | MAKAKFERTK PHCNIGTIGH VDHGKTSLTA AITKVLAETG GATFVDYANI DKAPEERERG ITISTAHVEY ETEQRHYAHV DCPGHADYVK NMITGAAQMD GGILVVSATD GPMPQTREHI LLARQVGVPA LVVFMNKVDL VDDAEILELV ELEVRELLSS YEFPGDDIPV IKGSAVKALD GTNDEIGRNA VLELMAAVDS YIPQPERPLD KPFLMPIEDV FSISGRGTVV TGRVETGMVK VGEEVEIVGI KDTRKTTVTG VEMFRKLLDQ GQAGDNIGAL IRGVGREEVE RGQVLAKPGS IKPHTDFSSE VYVLSKEEGG RHTPFFANYR PQFYFRTTDV TGTVELPEGT EMVMPGDNVK LGVKLIAPIA MEEGLRFSIR EGGRTVGAGV VSSISK
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