| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1352 |
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| Symbol | rplD |
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| ID | 5200525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1499688 |
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| End bp | 1500314 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580899 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001261855 |
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| Protein GI | 148554273 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.149539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTCA AGGTCCAGAC CCTCGACGCC AAGGCGTCGG GTGACATCGA GCTCAACGAC
GAGGTCTTCG CCGTCGAGCC GCGCGCCGAC ATTCTCGCCC GCGTCGTCCA GTGGCAGCTC
CACAACCGTC GCGCTCCGGC GCGTGCGGCG CGCGAGCGTT CGGACGTCGC CCGCACGGGC
AAGAAGTTCG GTCGCCAGAA GGGCGGCGGC ACCGCCCGTC ACGGCGATCG CCGCGCTCCC
GTCTTCATCG GCGGCGGCAA GGCCCATGGT CCCCGCGCCC GGGTGTTCGA GAGCAGCCTC
AACAAGAAGG TCCGCGCGCT CGGCCTGAAG ATGGCGCTGT CGTCGAAGGC CAAGGACGGC
AAGCTGGTCG TGGTCGACAC GCTCGAGCTC AAGGACGCCA AGACCAAGGC GCTGATCGCA
AAGATCGGCA AGCTCGGTTT CGGCGCGACG GCGCTGGTGA TCGACGGCGA GGCGGTCGAC
AACGGCTTCC AGCTCGCTTC GTCGAACATC CACACGATCA ACGTGCTGCC GGCGATCGGT
GCCAACGTCT ACGACATTCT GAAGCATGAG ACGCTGGTGC TGACGCGCGC CGCTGTCGAG
AAGCTGGAGG CGCGCTTCAA TGGCTAA
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| Protein sequence | MKVKVQTLDA KASGDIELND EVFAVEPRAD ILARVVQWQL HNRRAPARAA RERSDVARTG
KKFGRQKGGG TARHGDRRAP VFIGGGKAHG PRARVFESSL NKKVRALGLK MALSSKAKDG
KLVVVDTLEL KDAKTKALIA KIGKLGFGAT ALVIDGEAVD NGFQLASSNI HTINVLPAIG
ANVYDILKHE TLVLTRAAVE KLEARFNG
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