Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1301 |
Symbol | |
ID | 5200529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1455465 |
End bp | 1458434 |
Gene Length | 2970 bp |
Protein Length | 989 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640580848 |
Product | hypothetical protein |
Protein accession | YP_001261804 |
Protein GI | 148554222 |
COG category | [S] Function unknown |
COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAAC ACGTCGTTCT GGCGGTGACG ATGGCGATGG CGGGCGTTCT CGCGACATCG GCGCCCGCCT TGTCCGCAGC GCGGCCGGCC AGCGCCGCCG GCCCGTCGCC GGCCGAAAAG GCGCGGCTGG AGAAGATGCG CAAGGCCGCC GACGACCTGG ACGAAGGCGC CGATCCGGCG GCCTATCGCA AGGCGTGGGA AGCGGTGCTG GCCTATGGCG AGACGCTCTA TCCCGCCGGA CACCCCGAGC TGGCCTGGCT GGAGGGCGAA CTCGTCACCG CCGATTATCT GCAAGGCGAC GTCACCGGCG CGCTCGCACG GGCCGAACGC CTGGGCGCGC GGCTCGAAGC CGGCGGCCCC GAATATCGCG ACCGGCGGAT GGAGCTGGCC AATGCCCAGG TCGTGATCCT GATGACGCTC AGCGACCATG ATCGCGCGCG CAAGCTCGCC GCCCAGGTCC TCGAATGGCG GATCGCCAGG AGCGAGGGCA AGCCGAGCAG CAACGTCGCC GCGGCCTATT CCAACTACGC CAATGCGGAG TTCGAGTTCG GCAATTTCGA CAAGGCGATC GAGCTGGTCC GCAAGGCGAA TGCCGAGGAC CGCCGTCACG AGACCATCCC GGTGAACGCC GCGCCGCGCT TTGCCAACCT GCCGGTCTTC CTCCTGCAGT CGGGCCGGCT GGAAGAGGCG ATCGAGGAAG CGCGCGCGAC GCAGGCGACG CTGGAGGGCT TCATGCCCAA GGGCCATCCC TATCTGGCGA CCAACCTCAA TACCCTCGCC CGGATATTGC TCACGCTCGG TCGCCCCGGC GAGGCGGAGA CGGTGTCGCG CAAGGCCGTG GACATCGCCG TGGCACGCTT CGGCCAGAGC CAGCAGGCGG TGAGCTACAT GGTCACGGTC GCGCAGGCGC TGATCGCCCA GGGCAAGACC GACGAGGCGA TCGCCACCGC GCGCCAGGCG GCGGACATCC TGACCAAGGG GATCGGCCCG GACGCCCAGC GCACGCTGAT GGCGCGCGAA AGCTATGCCG ATGCGATCGC CGCCTCGGGC GATCGCGAGC AGGCCATCGC GATCCTGCGC GAGGTGAACG CGACGCGCGA CCGCAAGCTG CCGCCCTTCC ACCGCGACCG CATCACCGGC CGCGACCAGC TCGCGATCTT CTCGTTCGAG CAGGGCGACA TGGCGGCGGC GAAGACCGCC CAGACGGAGG CGCAGGCCCT GCGCCGCTCG ACCTTCCCCG CCGAAGATAT CGCCAACCTC ACCGGCGAGG CGCGGCTGGG CGCGATCGAA GTGCATGGCG GCGACAAGGC GGGCGGGCTG AAACGCGTCG AGGCGGCGGC GGCGCTGCTC GACGAACGGC TCGCCCGGCT GCGTGCGGCC GGCACCCGGC GATCGGGCCT CGAGCTCGAG ATCCGGGCCG CCTATGGCTG GGCGCTCGAT GCGGCGGTGA CCGCCGGCGA CGAGGCGCTG GCCTTCCGCC TGGCCCAGCG GATGATGGAG AGCTCGGCGG GGCGCGCCGT ACAGGAGGAG GAAGCGCGAT CGGTAGCCGG CGATCCGCAA CTGGCCGAGC TCATCCGCGA GCGCCAGGAC GCCGCGATCG AGCTAGAAGC CCTGCTCGAC CGCCAGCTTC GCCTCGCGGG ACGTGGCGCC GACACGGCGA CGATCGAAGC GGTGGCCGGC CAGCGCAAGG CGGCCGCCGT GCGGCTGGAA CAGCGCACCG CCGCCCTGGC CGCCCGCGCG CCCCAACTCG TCGCGCCGGC GGGCTCGGAG CCGCTCACGC TCGAAAGCGT GCGCGAGGCG CTCCGATCCG ACGAGGCATT GTTGATCGCC GGGGTGTCCG AAAGCCGCAC CACCCTGTTC GCCATCACGC GGGATCGCGT GTCGATGGCC ATGTCCCCGG CCACCGCGCA ACAGATCGCG ACGCTGGTGA CCAGGCTCCG CACGGGCATC AGCCTACAGG CAGCGGCAGG GGCCGGACGA AGCTTCGCCC TCCGCGCCGC ATCGCCGACC CGCGCCGCGA TCTCGGATGA CCGGACGGCA ACGGGTTTCG ATTTCGATGC CTCGGCACGA CTGCACGACA TCCTGTTTCC CAAGGCCATT CGGAGCACGA TAGCGAACAG GTCCCGCCTG CTGGTCGCGG CCAATGCGAG CCTGACGACG CTTCCCCTCG CCGTGCTCGC GCCGCAACGG AGCGATCCGA CCCTGCGCAA TGCGCATTGG CTGATCCGGG ACCATGTCCT CGTCACCCTG CCGTCCATCG CCAGCGTCAC GTCCGCCCGC TCGACCGGCA CCGGACGGAA GGTGCACAGC TTCTTCGCGG TCGGCGCGCC GGAGCTGGCG CCCGCGGGAA CGGCCATGGC GTTCCGGTCG GCCGACATGG CCCGGCAGGT CCGGGACCTG CCCGCGCTGC CCGCCACGGA GCCCGAGCTT CGCACCGTCG GCCGCGCGCT CGCGGCGCCC GAGCAATCAA TCCTCACCGG CAGCCGCGCG ACCGAGCAGG CGATCCGCAC CGCCGACCTG ACGCGCACCA ACGTCCTCGC CTTCGCCACC CACGGCCTGA TGGCCGGCGA TCTCGACGGG CTCGACGAGC CCGCGCTGGT GATGACCCCG GGCGGCTCCG ACGACGGGCT GCTCACCGCC AGCGAGATCA TGCGCCTGCG CCTGGCCGCG GACTGGGTGA TCCTGTCCGC CTGCAACACG GCGGCGGGCG GCAGCGGCGA CGACAGCGGC CTGGCCGGCA TCGCCCGGGC CTTCCTCTAT GCGGGGGGCC GCAACCTGCT GGCGTCGCAC TGGGCCGTCC GCGACGATGC CGCGGCCTAT CTCTCGGTCG GAACCGTCCG GAAATATGGA CGCGGCGAAG ACCCCGCGCG GGCGCTGCGC GAGGCGATGC TGCGGATGAT CGACAAGCGG CCGTTCGAAG GAGCCGAGCA GCCGGTCAAC TGGGCGCCCT TCGTCTTCGT CGGGCGTTAG
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Protein sequence | MRKHVVLAVT MAMAGVLATS APALSAARPA SAAGPSPAEK ARLEKMRKAA DDLDEGADPA AYRKAWEAVL AYGETLYPAG HPELAWLEGE LVTADYLQGD VTGALARAER LGARLEAGGP EYRDRRMELA NAQVVILMTL SDHDRARKLA AQVLEWRIAR SEGKPSSNVA AAYSNYANAE FEFGNFDKAI ELVRKANAED RRHETIPVNA APRFANLPVF LLQSGRLEEA IEEARATQAT LEGFMPKGHP YLATNLNTLA RILLTLGRPG EAETVSRKAV DIAVARFGQS QQAVSYMVTV AQALIAQGKT DEAIATARQA ADILTKGIGP DAQRTLMARE SYADAIAASG DREQAIAILR EVNATRDRKL PPFHRDRITG RDQLAIFSFE QGDMAAAKTA QTEAQALRRS TFPAEDIANL TGEARLGAIE VHGGDKAGGL KRVEAAAALL DERLARLRAA GTRRSGLELE IRAAYGWALD AAVTAGDEAL AFRLAQRMME SSAGRAVQEE EARSVAGDPQ LAELIRERQD AAIELEALLD RQLRLAGRGA DTATIEAVAG QRKAAAVRLE QRTAALAARA PQLVAPAGSE PLTLESVREA LRSDEALLIA GVSESRTTLF AITRDRVSMA MSPATAQQIA TLVTRLRTGI SLQAAAGAGR SFALRAASPT RAAISDDRTA TGFDFDASAR LHDILFPKAI RSTIANRSRL LVAANASLTT LPLAVLAPQR SDPTLRNAHW LIRDHVLVTL PSIASVTSAR STGTGRKVHS FFAVGAPELA PAGTAMAFRS ADMARQVRDL PALPATEPEL RTVGRALAAP EQSILTGSRA TEQAIRTADL TRTNVLAFAT HGLMAGDLDG LDEPALVMTP GGSDDGLLTA SEIMRLRLAA DWVILSACNT AAGGSGDDSG LAGIARAFLY AGGRNLLASH WAVRDDAAAY LSVGTVRKYG RGEDPARALR EAMLRMIDKR PFEGAEQPVN WAPFVFVGR
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