Gene Swit_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1263 
Symbol 
ID5197937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1418824 
End bp1419192 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content70% 
IMG OID640580810 
Productrod binding-like protein 
Protein accessionYP_001261766 
Protein GI148554184 
COG category[M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3951] Rod binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.346021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.499347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA ATGTTTCCGC GAAGGTCGGC GCGCTCGCCG ATCCCAAGGC GAGCGGGCTC 
GACCAGCTCA AGGCCGCCGC GAAGCAGTTC GAGGCGATCT TCACCCGCCA GATGCTCAAG
TCGACCCGCG ACGCGAAGCT GTGCGACGAC GATCTGTTCG GCAGCGACGC GACCGACCAG
TTCCGCGACA TGCAGGACTC GAACCTCGCC GACCAGCTCG CGAACAAGGG CGCGATCGGC
ATCGCCGACC TGCTCGTCCG CCAGTTCCAG GCGCGCGTGG CGAAGCCCGC CGCCACGACC
GGATCGACCG GATCGACCGA CGCCGCCGCG ACCGCCGACG CCGCCAAGGC CGACGGGGCG
AGCGGATGA
 
Protein sequence
MIGNVSAKVG ALADPKASGL DQLKAAAKQF EAIFTRQMLK STRDAKLCDD DLFGSDATDQ 
FRDMQDSNLA DQLANKGAIG IADLLVRQFQ ARVAKPAATT GSTGSTDAAA TADAAKADGA
SG