| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1253 |
|---|
| Symbol | |
|---|
| ID | 5198132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1409828 |
|---|
| End bp | 1410373 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640580800 |
|---|
| Product | GrpE protein |
|---|
| Protein accession | YP_001261756 |
|---|
| Protein GI | 148554174 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.329053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG AGAATATCGG CGAGAACGAA GTCGAGACCC CCGAGACCGA ACCGTCGGCC
GAGGCCGAGG TCGAGAGCCC GTTCGCCAAG CTCGAAGGCG AACTGGAGAA GCTGCGCAAC
GAGGTGCTGT ACGCCCAGGC GGAGACCCAG AACGTCCGCC GCCGGCTGGA GAAGGAAAAG
GCCGACGCCT CGGCCTATGC CGCGACCGGC TTCGCGCGCG ACATGCTGTC GGTCGCCGAC
AATCTCGGCC GCGCGCTGGC CGCGATTCCC GCCGAGCTGC GCGAGGACGA CCGGATCGGT
TCGCTGCTGA CCGGCATCGA GATGACCGCC AAGGAGCTGG AGAACGTGTT CCAGCGCAAC
GGCATCAGCA AGATCGAGGC GCTCGGCGCC AAGCTCGACC CGAATCGCCA CCAGGCGATG
GTCGAGCTGC CCAGCGCCGA CGCCGAGCCC GGCACGGTGA TCCAGGAGAT GCAGGCCGGC
TACATGATCA AGGACCGGCT GCTGCGCCCG GCCCTGGTCG GCGTCGCGAA GACGCCGGAA
GCCTAA
|
|---|
| Protein sequence | MSEENIGENE VETPETEPSA EAEVESPFAK LEGELEKLRN EVLYAQAETQ NVRRRLEKEK
ADASAYAATG FARDMLSVAD NLGRALAAIP AELREDDRIG SLLTGIEMTA KELENVFQRN
GISKIEALGA KLDPNRHQAM VELPSADAEP GTVIQEMQAG YMIKDRLLRP ALVGVAKTPE
A
|
|---|
| |