Gene Swit_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1251 
Symbol 
ID5196438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1408299 
End bp1408751 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID640580798 
Producthypothetical protein 
Protein accessionYP_001261754 
Protein GI148554172 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.303658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCA CGATTGCCGC CGTCATGGCC CTTGTCGCCC TGTCCGCCTG CCAGCCCAGA 
GGCGCCGGCC AGCCGGTGGT GAAGGGCGCC CAGGTACGGC TCGCCGCGGT GCCCGGCGGC
CCGGCCGGCG GCTATTTCAC GCTGGAGGGC GGCGCGAAGG ACGATCGGCT GCTGAGGATC
GACAGCGCCG TGGTGAACAA GATAGAGTTG CACGAGAGCG TCATGAACGG GGGCGTGATG
ACGATGCGGC CGATCGCCGA AGTGCCGGTT CCGGCAGGGA AGACCGTCGT GTTCGCGCCG
GGCGGCAGCC ATGCGATGCT GTTCGGCGTC GATCCGCGAA TCACCGCGGG CACCGGCGTG
CCGATGCTGT TCACCTTCGC CAGCGGCGCG CGGATCGAGG TCGAGGCCAA GTCGGTCGCG
GCCGGGGACG ACATGGACGG CATGCGCCAC TGA
 
Protein sequence
MHRTIAAVMA LVALSACQPR GAGQPVVKGA QVRLAAVPGG PAGGYFTLEG GAKDDRLLRI 
DSAVVNKIEL HESVMNGGVM TMRPIAEVPV PAGKTVVFAP GGSHAMLFGV DPRITAGTGV
PMLFTFASGA RIEVEAKSVA AGDDMDGMRH