| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1245 |
|---|
| Symbol | |
|---|
| ID | 5199206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1400748 |
|---|
| End bp | 1401620 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640580792 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001261748 |
|---|
| Protein GI | 148554166 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.433154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAT GGGAAGACGG TTTTTGGTCC TCGAAGGATG GTCTGCGCCT GCATTATCGC
GACTATCCGG CCAAGGCTGG AAGCACCCGC CCGCCGATCA TCTGCCTGCC GGGCCTGACC
CGCAACGCGC GCGACTTCGC GCCGCTGGCC GACCGGCTGG CGGGCGACTG GCGCTTGATC
GTCGTCGAAC TGCGCGGGCG CGGCGACAGC GAGCGCGCCA AGGACCCGCT CAGCTATGTC
CCCGTCACCT ATCTGGAGGA CGTGACGGCG CTGATCGCGG AGGCGGGGCT CGACCGCTTC
GTCCTGTTCG GCACTTCGCT GGGCGGCATA TTGTCGATGC TGATCAGCGC GACGATGCCG
GGGCGGGTCG CGGGGCTGCT GCTCAACGAC ATAGGGCCGG CGATCGATCC GGCGGGGCTG
GTTCGGATTC GCGGCTATGT CGGGCGCGGC GGCAGCTATC CGACCTGGCT GCACGCGGCG
CGGTCGCTGG CCGAGGTCCA TGCGGTCGCC TATCCCGACT ATACGCTCGA CGACTGGCTC
GGCATGGCCA AGCGATTGTA CCGCCTGACG CCGGCCGGCC GGATCGTCGC CGATTATGAC
AGTGCGATCG CCGAGCCGTT CAAGGTGCCG GGCAACGAGA GCGCGGGCGA CCTCTGGCCG
CTGGCCGAGG CGCTGAAGCC GATCCCGGCG CTGCTGGTGC GCGGCGGCCT GTCGGACATA
GTGTCGGCCG GGACCGCCGA TCGCATGCAG GCCGAGCTGC CGCTGCTCGA ACGGGTCGAC
CTGCCGCGCA TCGGCCATGC GCCGACCCTG TTCGAGCCCG AATGCGAAGC CGCGATCGAC
CGGCTGCTCG CGCGGGTCGG GCGGGCCGGC TGA
|
|---|
| Protein sequence | MAEWEDGFWS SKDGLRLHYR DYPAKAGSTR PPIICLPGLT RNARDFAPLA DRLAGDWRLI
VVELRGRGDS ERAKDPLSYV PVTYLEDVTA LIAEAGLDRF VLFGTSLGGI LSMLISATMP
GRVAGLLLND IGPAIDPAGL VRIRGYVGRG GSYPTWLHAA RSLAEVHAVA YPDYTLDDWL
GMAKRLYRLT PAGRIVADYD SAIAEPFKVP GNESAGDLWP LAEALKPIPA LLVRGGLSDI
VSAGTADRMQ AELPLLERVD LPRIGHAPTL FEPECEAAID RLLARVGRAG
|
|---|
| |