Gene Swit_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1200 
Symbol 
ID5199172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1360076 
End bp1360489 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content72% 
IMG OID640580747 
Productglobin 
Protein accessionYP_001261704 
Protein GI148554122 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.139357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATG GCGGGATCGA GGCGGGGACG ACGCCCTATG AGCGGATCGG CGGCGCGCCG 
GTGGTGCGGG CGATCGTCGA CCGCTTCTAC GACCTGATGG ATGCGGAGCC GCGCTTCGCC
GCGCTGCGCG CGCTGCATGC CGACGATCTC GCGCCGATGC GCCGCTCGCT CGCTGGCTTC
CTCACCGCCT GGCTCGGCGG GCCGCGCGAC TGGTTCGTGG ACAATCCCGG CAAATGCGTG
ATGTCGGTCC ATGGCGGGAT CGCGATTGGC GCCGATACCG CCCGGCAATG GGCCGACGCG
ATGCGGCTGG CGATCGTCGA ACGGACGAGC GACCCGGACC TCGCCGCGCG GATGGCCGAT
GCCCTGGAGG GCATGGCGCT GGCGATGGCC CGGGTCGAGC CCGTGGGAGG CTAA
 
Protein sequence
MADGGIEAGT TPYERIGGAP VVRAIVDRFY DLMDAEPRFA ALRALHADDL APMRRSLAGF 
LTAWLGGPRD WFVDNPGKCV MSVHGGIAIG ADTARQWADA MRLAIVERTS DPDLAARMAD
ALEGMALAMA RVEPVGG