Gene Swit_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1199 
Symbol 
ID5199171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1359521 
End bp1360069 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID640580746 
Productglutathione peroxidase 
Protein accessionYP_001261703 
Protein GI148554121 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0894577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG ATATCCAGCA GATTCCGCTC AAGACGATCG GCGGCGCCGA CGCCACCCTC 
GGCGACTATG CCGGCAAGGT GCTGCTGGCG GTCAACGTCG CGTCGAAATG CGGCCTGACC
CCGCAATATA CCGCGCTCGA GGCGCTGTAC GGCCAGTACA AGGACAAGGG CTTCGCCGTA
CTCGGCTTCC CCGCCAATAA TTTCGGCGCG CAGGAGCCCG GCACCGAGAG CGAGATCCAG
GAATTCTGCA CGACCAACTA CGGCGTCGAC TTCCCGATGT TCGCCAAGCT CTCGGTCAAG
GGCGACGACC AGCATCCGCT CTACGCCAAG CTCGTCGCGG CGCAGCCCGA CAAGACCTTC
AAGGACGGCA GCTTCAAGGA GAAGCTGGCC GGCTACGGCA TCGTGCCGGA GAAGGACACC
GACGTGCTGT GGAACTTCGA GAAGTTCCTG ATCGCCAAGG ACGGCACCGT CGCCGGCCGC
TTCGCGCCCG ACATCGCCCC CGACGATCCC ATCATCACCG GCGCGATCGA GGCCGAACTG
GCCAAGTAA
 
Protein sequence
MATDIQQIPL KTIGGADATL GDYAGKVLLA VNVASKCGLT PQYTALEALY GQYKDKGFAV 
LGFPANNFGA QEPGTESEIQ EFCTTNYGVD FPMFAKLSVK GDDQHPLYAK LVAAQPDKTF
KDGSFKEKLA GYGIVPEKDT DVLWNFEKFL IAKDGTVAGR FAPDIAPDDP IITGAIEAEL
AK