Gene Swit_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1173 
Symbol 
ID5198511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1334613 
End bp1335092 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID640580720 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001261677 
Protein GI148554095 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG ATGGCTCGCT CGACTCCTAT GATGTCCGTA TCCTGCGGCG GCTGACCGAG 
GACGGGCGCA TCACCTGGCG GGACCTGGCG GCCGAGATCG GCCTGTCGCT GACGCCGACC
CTGCGGCGCG TTCGCCTGCT CGAGGAGGCG GGCTATATCA CCGGCTATTT CGCGGGGCTC
GACGAGCGGC GGCTGGCCGG CGCGATGATC GTGTTCATCT CGGTCACGCT CGAACGGCAG
GTGCGCGACA TATTGGAGAG CTTCGAGGAA CGGGTGAGCG CGCTGCCCGA GATCATGAGC
GGCTTCCTGA TGACCGGCGG TGCCGACTAT CTGCTCCGCG CCGTCGTCCG CGACCTCGAC
CATTATCGCC ACCTGCTCGA CGACCTCACC CGGATTCCGG GCGTCGCGCA CATCCAGAGC
AGCTTCGCGC TCAAATCCTT CATCAACCGC CCGGCGCCGA TCGTCCGGGC GGCCGTGTAG
 
Protein sequence
MNADGSLDSY DVRILRRLTE DGRITWRDLA AEIGLSLTPT LRRVRLLEEA GYITGYFAGL 
DERRLAGAMI VFISVTLERQ VRDILESFEE RVSALPEIMS GFLMTGGADY LLRAVVRDLD
HYRHLLDDLT RIPGVAHIQS SFALKSFINR PAPIVRAAV