Gene Swit_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1139 
Symbol 
ID5198841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1283301 
End bp1283627 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content67% 
IMG OID640580686 
Productchorismate mutase 
Protein accessionYP_001261643 
Protein GI148554061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.522403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCACCGCAAG CAAAGCCGTC CCCGCCGCCG AATGCACCGA CATGGCGCAG 
GTCCGCGCCG CGATCGACGG CCTCGACACG CTGATCGTCA GCCTGCTGGC CGAACGGATG
CGCTATATCG AGGCGGCGGC GCGCATCAAG CCCGCCCGCG ACACCGTCCG CGACGAGGTG
CGCAAGGCCG AGGTCGTCGC CCATGCCGTC AAGGTCGCCA ATGATCGCGG CTTTCCGCCG
AAGCTGGCCT ATCGGCTCTA CGACATGCTG GTCGAGGGAT CGATCGCGCA CGAATTCGAC
GTGTTCGACG CCCGCGATCC TTCCTGA
 
Protein sequence
MTDITASKAV PAAECTDMAQ VRAAIDGLDT LIVSLLAERM RYIEAAARIK PARDTVRDEV 
RKAEVVAHAV KVANDRGFPP KLAYRLYDML VEGSIAHEFD VFDARDPS