| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1133 |
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| Symbol | |
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| ID | 5200144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1276129 |
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| End bp | 1276890 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580680 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001261637 |
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| Protein GI | 148554055 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.10914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGACCG ATATCCCCCG TCAGGATGAG CGGGCAGCGA ACGGGATCGC TCCGCCCCCC
GTCATCGTCC TCGTGCGTCC GCAGCTCGGC GAGAATATCG GCAAGGCGGC GCGGGCGATG
CTCAATTTCG GGCTGACCGA GATGCGGCTG GTGACCCCGC GCGACGGCTG GCCCAACCCG
CAGGCCGGCC CGGCCGCCTC CGGCGCCGAC ATCGTCCTCG AAGGCGCCCG CGTGTTCGAC
AGCGTGGCGG AAGCGACCGC CGATTGCGCG CATGTCTACG CCACCACCGT CCGCAAGCGC
GGCGTGACCA AGCCGGTGAT GACGCCGGAG GAGGCCGCGC GCGGCATCCA TGGCGAGCCC
GGCCGCTCCG CCATCCTGTT CGGCCCCGAA CGGTCCGGGC TGGAGACCGA CGACGTCGCG
GTCGCGCGGA CGATCGTGAC GGTTCCCATC AACCCGGAGT TCGGCAGCCT CAACCTCGCC
CAGGCGGTGA TCCTGGTCGC CTATGAATGG TCGAAGGGAA TAGCGCTCGC CTCGCCGCCC
GCGGTCGACC TCGACCCGCC GGCGCCACAG GTCGAGCTCG AGGGACTGAT CGGTCATCTC
GACCGGCTGC TCGCCGAATC GGGTTATTAT TTTCCGCCCG ATCGGGTGCC GGCGACGCGC
CGGACGCTGC GCAGCCTGCT GACCAAGCCC GCCTGGAACG CGCAGGAAGT GCGGACGCTG
CGAGGCGTCC TGAGTACGCT GGAGAAACCC CGGAGCCGGT AA
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| Protein sequence | MTTDIPRQDE RAANGIAPPP VIVLVRPQLG ENIGKAARAM LNFGLTEMRL VTPRDGWPNP
QAGPAASGAD IVLEGARVFD SVAEATADCA HVYATTVRKR GVTKPVMTPE EAARGIHGEP
GRSAILFGPE RSGLETDDVA VARTIVTVPI NPEFGSLNLA QAVILVAYEW SKGIALASPP
AVDLDPPAPQ VELEGLIGHL DRLLAESGYY FPPDRVPATR RTLRSLLTKP AWNAQEVRTL
RGVLSTLEKP RSR
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