Gene Swit_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1110 
Symbol 
ID5199638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1248481 
End bp1248861 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content72% 
IMG OID640580657 
ProductDGPFAETKE family protein 
Protein accessionYP_001261614 
Protein GI148554032 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.987937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTACG CGATCCTCTG CTATGATTCC GAAGAGGTGG TCGGCGCCTG GAGCGCGGAA 
ACCGAGACGG CGGTGATGGC GCGGCTGGGC GCGGTGCAGG ACCGGCTTCG CGCCGAAGGG
CGGCTCGGCC CCGTCGCCCG GCTGATGCCG ACGACGGCGG CGACCACGGT GCGCAAGGGC
GCCGAGCCGC TGGTGCTAGA CGGCCCCTTC GCCGAAACCA AGGAACAGCT CCTCGGCTTC
TACGTCGTCG ATTGCGACAG CCTCGACGCC GCGATCGAGG TCGCGGCCGA ACTCGGCCGG
GCGAGCGGCT CGGCCGGCGC GCACGAGGTG CGGCCGCTGA TGCTCTACCG GCCGGGCGAG
GCGCAGGTGG AGGCTTCGTG A
 
Protein sequence
MLYAILCYDS EEVVGAWSAE TETAVMARLG AVQDRLRAEG RLGPVARLMP TTAATTVRKG 
AEPLVLDGPF AETKEQLLGF YVVDCDSLDA AIEVAAELGR ASGSAGAHEV RPLMLYRPGE
AQVEAS