| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1091 |
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| Symbol | |
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| ID | 5199561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1223162 |
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| End bp | 1224559 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580637 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001261595 |
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| Protein GI | 148554013 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.719825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGGG GACGGCAGGA CCTGACGCAG GGGCCGATCG CGAGCACCCT GTTGCTGTTC
GCCATCCCCA CGCTGGCGGC GAACGTCCTC CAGTCGCTCA ACGCCTCGAT CAACACGGTG
TGGATCGGGC GCTTCCTCGG TGAGCGGGCG CTGGCGGCGA CGGCGAACGC CAGCAACATC
CTGTTCCTGA TCTTCTCCGC GCTGTTCGGA TGCAGCATGG CGGCGATGAT CCTGGTGGGC
CAGCATATGG GCCGCAGGGA CGTCGACGGT GCCCGGCGCG CGGTCGGCGC GGCGGCGACG
CTGCTGCTCG GCATATCCTT CGTGATGATG GCGATCGGCA TCGGCCTGAC CGACAAGCTG
CTCCACCTGC TCGGCACCCC GGCCGACGCG GCCCCGCTCG CCTCGGCCTA TCTCAAGATG
ATGTTCTGGA GCTTGCCGTT CAGCGCGATC ATGGTGCTGC TGATGATGAC CCTGCGGGGC
ATCGGCGATG CGATGACGCC GCTCTGGTTC ATGATCGTCG GGATCGTCCT CGACGCCGGG
CTCAATCCCT TCTTCATCGC CGGGATCGGT CCCTTTCCCG AAATGGGGAT CGTCGGGTCG
GCCGTGGCGA CGCTGATCGC CAACGGGGTG TCGATGGTCG GCATGCTGGC CGTCGTCTAT
TGGCGCGACC TGCCGATCCG GCTGCGCGGC CGCGAACTCG CCTATCTGCT GCCCGGTCCC
GCGCTCATCC GCCTGATCTT CGGCAAGGGC ATGATGATGG GCCTGCAGAT GTTCGTACTC
ACCGCCGCCG CGCTGGTGAT GGTCGGGCTG GTCAACCAGG CCGGGGTGAT CGTGACCGCC
GCCTATGGCG TCGCCTTCCA GCTCTGGAAC TATATCCAGA TGCCGTCGAT GGCGGTGGCG
TCGGCGGTCA GCGCGATGGC GGCGCAGAAT ATCGGCGCCG GCCGCTGGGA CCGGCTGGGG
TCGATCACCA ATATCGGCCT GCTCTACAAT TTCCTGATGA CCGGCGTCCT GATCGCGCTG
CTGACGCTGG TCGACGATCA TGTGCTGGGC CTGTTCCTCG GCGCCGGGAG CCCGGCGATC
GGGGTGGCGG AGCGCATCCA CCTGCTGGCG AGCTGGAGCT TCCTCTTCTC CGGCGCGACG
ATGGTGATGC TCGGCACGAT CCGGGCGAAC GGCGTCGTGC TGATGCCGCT GATCATCATG
ATCGTCGGCC TGTTCGCCTG CCGGCTCGGC TTCGCGCTGT TCGCGCAGCC CTGGCTGCAT
TTCGACGCGC TGTGGTGGGC CTTCCCGGTC GGGTCGATGG CCTCCGCCGC GCTGACCTGG
GCCTATTACC GGCAGGGCGG CTGGAAGAAG ACCTCGTTGG TCGAGCAGGC CGAACGCGCC
GAGCACGCGC CGGCCTGA
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| Protein sequence | MAGGRQDLTQ GPIASTLLLF AIPTLAANVL QSLNASINTV WIGRFLGERA LAATANASNI
LFLIFSALFG CSMAAMILVG QHMGRRDVDG ARRAVGAAAT LLLGISFVMM AIGIGLTDKL
LHLLGTPADA APLASAYLKM MFWSLPFSAI MVLLMMTLRG IGDAMTPLWF MIVGIVLDAG
LNPFFIAGIG PFPEMGIVGS AVATLIANGV SMVGMLAVVY WRDLPIRLRG RELAYLLPGP
ALIRLIFGKG MMMGLQMFVL TAAALVMVGL VNQAGVIVTA AYGVAFQLWN YIQMPSMAVA
SAVSAMAAQN IGAGRWDRLG SITNIGLLYN FLMTGVLIAL LTLVDDHVLG LFLGAGSPAI
GVAERIHLLA SWSFLFSGAT MVMLGTIRAN GVVLMPLIIM IVGLFACRLG FALFAQPWLH
FDALWWAFPV GSMASAALTW AYYRQGGWKK TSLVEQAERA EHAPA
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