Gene Swit_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1088 
Symbol 
ID5199558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1220513 
End bp1221043 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content70% 
IMG OID640580634 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001261592 
Protein GI148554010 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.65463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA CCGAGCGGCT GGTCCTGCGC CGCTGGCGCG AAAGCGACGC CGCGCCCTTC 
GCCGCGATGG GCAACGACCC GGCGGTGATG GAATTCCTCG GCCCGCCGAT GACGGTCGAC
GATGTCGCGC AGGCGATCGA GCGCCAGAAC GCCTTCCTCG ACGCGCATGG CCATTGCTTC
TGGGCGATCG AGCGGCGCGA GGACGGCGCC TTCATGGGCT TTTGCGGGCT CAAGCCAGGG
GCGGCGGGAA CGCCGATCGA GGGCCGGGTC GAGATCGGCT GGCGGCTCGC CCGGCCGTTC
TGGGGGCAGG GTTATGCGCG CGAGGCGGCG CAGGCGTCGC TCGACTGGGC CTGGCGCCAT
CTCGACGCCG ACGCCGTCTG GGCGATCACC GTCCCCGCCA ATGTCCGTTC CTGGGGGCTG
ATGGAGCGGT TGGGCATGAC CCGGCGCCAC GGACTCGACT TCGATCATCC GCTGCCCGGC
CTCGAGGAGC GGCTGAAAGC CCATGTCACC TACAGCATCG AAAGACCATG A
 
Protein sequence
MIATERLVLR RWRESDAAPF AAMGNDPAVM EFLGPPMTVD DVAQAIERQN AFLDAHGHCF 
WAIERREDGA FMGFCGLKPG AAGTPIEGRV EIGWRLARPF WGQGYAREAA QASLDWAWRH
LDADAVWAIT VPANVRSWGL MERLGMTRRH GLDFDHPLPG LEERLKAHVT YSIERP