| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1068 |
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| Symbol | |
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| ID | 5199723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1192469 |
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| End bp | 1193410 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580613 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001261572 |
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| Protein GI | 148553990 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.168461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGTT GGGAAACCTA TGAAGCCTTC ATCGCCGTGG TCGAGTGCGG CAGCTTCACC
GCGGCGGCCG AAAGACTCCG ATTGTCGAAG TCGGCGATCA GCCGATCGGT CAGCTCGCTC
GAGGCCCGGC TGGGCAGCCA GCTCCTCTTC CGCACCACGC GCCGGCTGGC GCCGACCGAC
CTGGGCCGAT CGGTCTATCG CCGCTGCGTC GAGCTGTTCG ACATGCTGGC CGAGATCGAC
GCCGAGGCGA TGGAGCATGA CGCGTCGCTG CGCGGCAAGC TGCGCATCGT CGCGTCGGAC
AGCTTCGGCG AATGCTATAT CGCGCCGCTG GCCGCGGAGA TGATGCGGCT GCACGAGCAA
CTGGAGATCG AGTTCCTCGT CACCGACCGG ACGATCGACA TCGTCGCCGA CGGCTATGAC
ATGGCGATCC GCTACAATGC GCAGGTCGAT TCCAGCCTGA AGGTGCAGAA GCTGTACGAG
CTGCCGCACA TCTGCGCCGC CTCCCCGGAG TATCTGCTGC GCGCGGGCAC GCCTTTCACC
CTCGCGGACC TGACGCGGCA CAACTGCCTG GTGTCGACCT TCGAGGCCTG CCACGCCTGG
CGCTTCGGAA TGGGCCGGAC GCAGAAGACG CCCAATCTGT CCGGCAACTG GTGCAGCAAC
AACGGCCCGG CCCTGCTGAC CGCCGCGCTG AACGGCATCG GGATCGTGTG GCTGCCCGAA
CTCTATCTGC GGCCCTATAT AAAGGCCGGC GCGCTGATCG AGTTGCTGGG CGAGCATCGT
TCGGACCCGA TGCCGGTATG GGCGGTCTAT CCGGCCCGGC GACAGGCGGC GAAGGTCCGC
GCCTTCATCG ACTATGTGAA GTCCCGGCTG CCGGCGGCGG AAGGCATGAC CCCGGAACCG
CACCTCGCCG GGATCGTGCG TCCGCCCGTA TTGGTGGCCT GA
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| Protein sequence | MRRWETYEAF IAVVECGSFT AAAERLRLSK SAISRSVSSL EARLGSQLLF RTTRRLAPTD
LGRSVYRRCV ELFDMLAEID AEAMEHDASL RGKLRIVASD SFGECYIAPL AAEMMRLHEQ
LEIEFLVTDR TIDIVADGYD MAIRYNAQVD SSLKVQKLYE LPHICAASPE YLLRAGTPFT
LADLTRHNCL VSTFEACHAW RFGMGRTQKT PNLSGNWCSN NGPALLTAAL NGIGIVWLPE
LYLRPYIKAG ALIELLGEHR SDPMPVWAVY PARRQAAKVR AFIDYVKSRL PAAEGMTPEP
HLAGIVRPPV LVA
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