| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1064 |
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| Symbol | |
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| ID | 5197270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1185998 |
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| End bp | 1187575 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580609 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001261568 |
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| Protein GI | 148553986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.113781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCAG CCTCCACTTC CACGATCGTC GACGTCGCCA TCGTCGGCGC GGGCGCCGCC
GGCGCCATGC TCGCCGCCCG CTTCGCCGAG GCGGGCAAAT CGGTGACCGT CTTCGAAGCG
GGCCCGCCCT GGGATGCCTC CGCGCTGGTC AGCTCGCAGA TCTGGAGCCG CCGCCTGCGC
TGGGGCGGGC CGCCGGTCGC GACGACGGGC AAGGAGCCGA TCGGCTTCGG CTTCAACGCC
GGCTGGGGGC TCGGCGGCGC CGCGCTTCAC CATTATGGCA CCTGGCCCCG GCTGCACCCG
GCCGACTTCA CCATGCGCAC CGATCATGGG CGCGGGCTCG ACTGGCCGAT CGGCTATGAC
GACCTGCGAC CCTATTATGA CCGCATTCAG CGGGAGGTCG GGATTTCAGG CGATGCCGCG
GCCGAGACAT GGCGTCCGGC CGGCGATCCC TATCCGATGC CGCCGCTCGA TCCGCTGAAG
CAGGGCGCCG TCCTCGCCCG CGCCTTCGCC GCCGCCGGCA AGCGGGTCGC GCCCGCGCCG
ATGGCGATCA ACAGCGTCGA TTACGGCAAC CGGCCGGCCT GCATCTATGA CGGCTGGTGC
GACGCCGGCT GCCCGATCAT GGCGCTCGCC AACCCGCTTG CCATCTTCCT GCCCCGCGCC
GAACTGGCGG GGGCGAAGAT CCATGCCGAG ACGCCCGTCA CCCGTCTCCT GGCCACCGAC
GGCAAGCGGA TCGACGGCGT CGAATATCGC CTGAAGTCGG GCGAGCGCCG GGTCCAGCGC
GCCCGGCTCG TCGTCCTCGC CGGTTCGGTC GTCGGCAATC CGGCGCTGCT GCTCAATTCC
GCCAGCGCGG TCCATCCGCA CGGGGTGGGC AACGACCATG ACATGGTCGG CCGCTATGTG
ATGACGCACG GCCTGATCCA GATCCTCGGC CTGTTCCCCG ACGAGACCGA ACCGCATCGC
GGCGTCACCG GCGCGCACCT GATCAGCCAT GAGAATTACG GCAAGACCAG CACGGCGGGC
GCCTTCGGCA GCCGGCAATG GCTGGTGGCG GCCTCGATCA AGCCCAACGA CCTCGCCGGC
CTGGCCGCCG CGCGCATGGA CCTGAACGGC CCGGCGCTCG ACGCCTTCAT GCGACAGGCG
GTCCGCCACG GCGCCAACAT GATCGGCATG TGCGAAGAGG AACCCGATTC CGACAACCGG
GTCGAGCTGA CCGGCGAGGT CAACGCCTGG GGCATGCGCC GCGCGCGGAT GGTCCACGGC
TTCTCCGACG ATGCGAAGCG GCTCTGGGCG GCGATGCGCG ACGAAGGCAA GGCGATCTTC
AAGGCCGGCG GTGCGACCGA CATCTGGCAC ACCCAGATGA ACTCGGCGCA TCTGGCCGGC
GGCACCATCA TGGGCAGGGA CCCGGCGACC TCGGTCGCCG ACGGCCATGG CCGCGTCCAC
GGCATCGACA ATCTCTACAT CGCCGGCTCG GGCCTGTTCC CGACCGAAGG CGGCGCCAAC
CCGACCTTCA CCGTCCACGC CGTGGCGGAA CGCACCGCCG ATCAGATATT GCGCGACCGG
CCCGAACTTT TCGCCTGA
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| Protein sequence | MTAASTSTIV DVAIVGAGAA GAMLAARFAE AGKSVTVFEA GPPWDASALV SSQIWSRRLR
WGGPPVATTG KEPIGFGFNA GWGLGGAALH HYGTWPRLHP ADFTMRTDHG RGLDWPIGYD
DLRPYYDRIQ REVGISGDAA AETWRPAGDP YPMPPLDPLK QGAVLARAFA AAGKRVAPAP
MAINSVDYGN RPACIYDGWC DAGCPIMALA NPLAIFLPRA ELAGAKIHAE TPVTRLLATD
GKRIDGVEYR LKSGERRVQR ARLVVLAGSV VGNPALLLNS ASAVHPHGVG NDHDMVGRYV
MTHGLIQILG LFPDETEPHR GVTGAHLISH ENYGKTSTAG AFGSRQWLVA ASIKPNDLAG
LAAARMDLNG PALDAFMRQA VRHGANMIGM CEEEPDSDNR VELTGEVNAW GMRRARMVHG
FSDDAKRLWA AMRDEGKAIF KAGGATDIWH TQMNSAHLAG GTIMGRDPAT SVADGHGRVH
GIDNLYIAGS GLFPTEGGAN PTFTVHAVAE RTADQILRDR PELFA
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