| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1056 |
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| Symbol | |
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| ID | 5198758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1176830 |
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| End bp | 1177822 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580601 |
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| Product | transketolase domain-containing protein |
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| Protein accession | YP_001261560 |
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| Protein GI | 148553978 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.329928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.107881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG CGACCTTCCT GGAGGCGATC CGCCAGGCCC AATATGAGGA GATGACCCGC
GACGAGCGCG TCTTCATCAT GGGCGAGGAC ATCATCTGCA ACGTGTTCGG CACGACGACG
GGCTTCGTCG ACGCCTTCGG GACCGAACGG GTGCGCGACA CGCCGATCTC GGAGAACGGC
TTCATCGGCG CGGCGGGCGG GGCGGCGATG GTCGGCATGC GGCCGATCGT CGACGCGACG
ATCTCCTCCT TCCTCTATCC GGCGATGGAC CAGATCATGA GCATCATCGC CAAGTCGCGC
TACATCTATG GCGGGCAGGC GCGGCTGCCG CTCGTGATCC GCAGCTGCCT GTTCTACGGC
AATTCCAACG CCGCGCAGCA TTCCGACCGC AACTATTCGA TGTTCATGAA CGTGCCGGGG
CTGAAGATCA TGGTCCCGTC CAACGCCCAT GACATGAAGG GCATGCTCAA GGCGGCGGTC
CGCGACGACG ATCCGGTGCT CTGCTTCGAG GATTCGACCT GCTGGATGTC GAAGGCGGAG
CTGCCCGACG ATCCCGACTT CCTGATCCCG CTCGGCAAGG GCGACATCAA GCGCGAGGGC
AGCGACGTCT CGATCATCGC GATCGGCGGC GCGGTGCCGC TGGCGCTCAA GGCGGCGAAC
GACCTCGCCG CGGAGGGCAT CTCGGCCGAG GTGGTCGACC CGCGCAGCCT GGTCCCGCTC
GACAAGGAGC TGATCCTCCG GTCCGTGCGC AAGACCGGCC GGGCGATCAC GGTCGATCCC
GCGCACCAGA CGTGCAGCGC GGGCAGCGAG ATCGCCGCGA TCATCGCCGA ACGCGCCTTC
GACGCGCTGC GCGGCCCGGT GCTGCGGATC GCCACCGCCG ACACGCACCT GCCCTTCTCC
CCGGCGATCG AGAAGGCGCT CTATCCGTCG CCCGAACGCA TCGTCGCGGC CGCCCGCAAG
CTGGTCGGCG TCCGCCAGCC CGAAAACGCC TGA
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| Protein sequence | MAKATFLEAI RQAQYEEMTR DERVFIMGED IICNVFGTTT GFVDAFGTER VRDTPISENG
FIGAAGGAAM VGMRPIVDAT ISSFLYPAMD QIMSIIAKSR YIYGGQARLP LVIRSCLFYG
NSNAAQHSDR NYSMFMNVPG LKIMVPSNAH DMKGMLKAAV RDDDPVLCFE DSTCWMSKAE
LPDDPDFLIP LGKGDIKREG SDVSIIAIGG AVPLALKAAN DLAAEGISAE VVDPRSLVPL
DKELILRSVR KTGRAITVDP AHQTCSAGSE IAAIIAERAF DALRGPVLRI ATADTHLPFS
PAIEKALYPS PERIVAAARK LVGVRQPENA
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