| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1049 |
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| Symbol | |
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| ID | 5198851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1169653 |
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| End bp | 1171134 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580594 |
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| Product | amidohydrolase |
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| Protein accession | YP_001261553 |
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| Protein GI | 148553971 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.390336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0140122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCA TCGTCTCGCG CCGCATCGCC GCGATGCTGC TCGCCACCGT CGCCGTCGCG
CCCGCCACGG CCGCGCCGCT CGACGCGCAG CAGACCGCCC AGATCCTGAA GCTGGCCCAG
GCGCAGGCGC CCGCGATGGA CAAGGCGGCG CTGGCAATCT GGAACTTCGC CGAGGTCGGC
TATCAGGAGC AGCGCAGCTC GGCCCTGCTC CAGGCACAGC TCAAATCCTC CGGCTTCACC
GTCACGCCCG GCGTGGCCGG CATGCCGACG GCCTTCGTCG CCAGCTATCG CAACGGCGAC
GGGCCCGTGA TCGCCATCCT CGCCGAGTTC GACGCCCTGC CCGGCCTGGC GCAGACCGCC
GATCCGGTGC GGACGCCGAT CGCCGGCCAG CGGGCGGGCC ATGGTTGCGG CCATAATCTG
TTCGGGGCGG CCTCGGCCGC CGCGGCGATC GCGGTGCGCA ACTGGATGGT CGCGCAGGGC
GTGAAGGGCG AGATCCGCGT CTATGGCGCG CCGGCGGAGG AAGGCGGATC GGGCAAGGTC
TACCTGGTGC GCGACGGCCT GTTCAAGGAT GTCGACGTCA CCCTGCACTG GCATCCCGGC
AGCACGAACG ACGCTTCCCA GACGTCGTCG CTCGCCAATA TCTCGGGCAA GTTCCGCTTC
CACGGCGTCG CCGCCCATGC CGCCGCCGCG CCCGATCGCG GCCGCTCGGC GCTCGACGGC
GTCCAGGTCA TGACCACCGC CGTCGAATTC CTGCGCGAGC ATGTGCCGGA CGGCACCCGC
ATCCACTATG TCATCACCAA TGGCGGCAAG GCACCGAACG TCGTCCCCGA CTTCGCCGAG
CTGTACCTCT ATGTCCGGCA TGGCGATCCC CAGGTGGTCA AGGACGTCTG GGCGCGGGTC
CTCAAGGCGG CCGAGGGCGC CGCGATCGCG ACCGGAACGA CCACCGACCA TGAGATCACC
GGCGGGGTCT ATTCGCTGCT GCCCAACGAA ACCCTGATGA AGGCGATGGA CGAGAGCCTC
CACGCGGTGC CGATCACGCC CTGGTCCGAC GGCGAGCAGG CGTTCGCGAC GAAGATCGCG
CAGGGCTTTG CCGGCAAACC CGCCGTGCTG GACGCCACCG TGATCGAGAC GGCCACCTTC
CGGGGAACAG GCGGCCTCAG CCAGGGGTCG ACCGACGTGT CGGACGTGAG CTGGACGGTG
CCGACGGTCG GCCTCTCGAC GATGACCTAT GTGCCCGGCA CCCCCGGCCA TAGCTGGCAG
GCGACCGCCG CCGCCGGCTC GCCGGTCGGC CTGAAGGGCG CCCGGACAGC GGCGGAAACG
CTGGCGCTGA CGGCCGGACG CCTGCTGGTC GACCGCGATC TGGTGGCCGC GGCGAAGCAG
GAATTCCAGA AGGCGCGCGG CGACGACTTC GTCTACAAGG CGATGGTCGG CGACCGGAAG
CCTCCGCTCG ACTATCGCAA GGACAGCGCC GGTTCGGAGT GA
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| Protein sequence | MPSIVSRRIA AMLLATVAVA PATAAPLDAQ QTAQILKLAQ AQAPAMDKAA LAIWNFAEVG
YQEQRSSALL QAQLKSSGFT VTPGVAGMPT AFVASYRNGD GPVIAILAEF DALPGLAQTA
DPVRTPIAGQ RAGHGCGHNL FGAASAAAAI AVRNWMVAQG VKGEIRVYGA PAEEGGSGKV
YLVRDGLFKD VDVTLHWHPG STNDASQTSS LANISGKFRF HGVAAHAAAA PDRGRSALDG
VQVMTTAVEF LREHVPDGTR IHYVITNGGK APNVVPDFAE LYLYVRHGDP QVVKDVWARV
LKAAEGAAIA TGTTTDHEIT GGVYSLLPNE TLMKAMDESL HAVPITPWSD GEQAFATKIA
QGFAGKPAVL DATVIETATF RGTGGLSQGS TDVSDVSWTV PTVGLSTMTY VPGTPGHSWQ
ATAAAGSPVG LKGARTAAET LALTAGRLLV DRDLVAAAKQ EFQKARGDDF VYKAMVGDRK
PPLDYRKDSA GSE
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