| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1042 |
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| Symbol | |
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| ID | 5197207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1159559 |
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| End bp | 1160635 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580587 |
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| Product | luciferase family protein |
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| Protein accession | YP_001261546 |
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| Protein GI | 148553964 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.548372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0698642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCG CGCTTATGTC GCTGGGCGAC ATTATGGACG ATCCCATCAC GGGGCGTCGC
TTCGACGCGT CCGAGCGCTA TGCCATGACC CTGGACGCTG CCGAGATCGC GGATCGTTCC
GGCATCCAGG GCTATTATAT CGGCGAGCAC CACGGCATCA GCTACACCTT CTCGTCGCCC
GCCGTGGTCC TCGCCGCGAT CGCCCAGCGG ACCAAGCGAC TCCGCCTCGG CACCGCGGTC
GCCCTCGCCG CGAACCTCGA CCCGTTCCGG ATGGCGGAGG ATTATGCGAC GGTCGACGTG
ATCTCCGGCG GCCGGCTGGA GCTGGTCACC GGACGCGGCA ATTTCTTCGA GAAGACCTTC
GACCTGTTCG GCCAGTCGTC GGCGGAATCG GCCGAGCGCT TCGCCGAGGC GATGGAGCTG
GCGTGCACGC TGTGGCCGGG CGAACCGGTC CATTGGGAGG GGCGCTTCCG CCCGCCGGTC
ACCGGCCAGC GGCTCGAACC GACCCCGGTC CAGCGCGAGC GGCCGCCCTT CTGGATCGGC
GGCGGCAGCT CGCCCGACAC CGCCAAGCTG GCGGGCCGGC TCGGCCTCAA CCTGATGTTG
CCGAGCGCGT TCGGGCGCCC CGACAAGTTC ATCCCGATCG CCGACATCTA TCGCGAGGCG
TTCGACAAGG CCGGGCACAC GCACGAACCG AAGGTCGGCG CCTGCTGGCA CGGCTGGGTC
GACAAGACCG ACGCGATCGC CCGCGAACGC TACGAGCCGC GCTACCGGGC CTATCACGCC
TTCAACCTGG GCGTGATCAG GAGCGTCAAC CCGAACCCGC CGCCCTATGT CAGCGCGCCG
TTCGACTATG AGCTGCTGTC GACCAAGGGA CCGGCGATCG TCGGCGGGCC CGACAAGTTC
GCCGACCGCC TGATCGAGCT GAGCCGGCTC GTCGGCGCCG ACGTCAACCT GATCAAGATG
GACATGGGCG GCGTCGGGCG CGAAGAATAT TGCGAGATGG TCGAGCGACT GGGCAGCGAT
GTGGTTCCCC AACTGAACGC CGCGGCGGCG CGCCCCGCAA TCGCGGCGAA CGGCTGA
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| Protein sequence | MQIALMSLGD IMDDPITGRR FDASERYAMT LDAAEIADRS GIQGYYIGEH HGISYTFSSP
AVVLAAIAQR TKRLRLGTAV ALAANLDPFR MAEDYATVDV ISGGRLELVT GRGNFFEKTF
DLFGQSSAES AERFAEAMEL ACTLWPGEPV HWEGRFRPPV TGQRLEPTPV QRERPPFWIG
GGSSPDTAKL AGRLGLNLML PSAFGRPDKF IPIADIYREA FDKAGHTHEP KVGACWHGWV
DKTDAIARER YEPRYRAYHA FNLGVIRSVN PNPPPYVSAP FDYELLSTKG PAIVGGPDKF
ADRLIELSRL VGADVNLIKM DMGGVGREEY CEMVERLGSD VVPQLNAAAA RPAIAANG
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