| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1039 |
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| Symbol | |
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| ID | 5198245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1156725 |
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| End bp | 1157699 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580584 |
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| Product | transketolase, central region |
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| Protein accession | YP_001261543 |
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| Protein GI | 148553961 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0489701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0714055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CGCGCTTCGC CCATGCGATC AACCGCGCGC TCGACGATGC GCTCGCGGCC
GATCCCTCGG TGCTGCTGCT CGGCGAGGAC ATCGCCAATG CCGGCGGCAC CTTCGCGGTC
ACGCGCGGCC TGCTCGACAA GCATGGGCCC GACCGGGTGA TCGACATGCC GATCGCCGAG
AATGCGATCG CCGGCATGGC GGTCGGCCTC GCGCTCGGCG GCTTCCGGCC GGTCGTCGAG
ATCATGTTCA TGGACTTCAT GACCCTGACC ATGGACGCGC TGGTCAACCA GGCGGCCAAG
CTCCACTTCA TGTTCGGCGG GCAGAGCGCG GTGCCGATGG TGGTGCGCAC CCAGCATGGC
GGCGGCCTCA ACGCCGGGCC GCAGCATTCG CAATGCCTGG AGGCGTGGTT CGCGCATATC
CCGGGCCTGA AGGTCGTCGT GCCCGCGACG CTCGACGACG CCTATGCGCT GCTGCGCAGC
GCGATCGACG ATCCCAACCC GGTCCTGTTC GTCGAGAACA AGGCGCTCTA CCCGATGAAG
GGCGCGCTGT CCGACGCGCC GCCCGCCGCC CCGATCGGCA AGGCGCGGAT CGCGCGGGCC
GGCAGCGACG TGACGATCGT CAGCTATGGC GCGATGGTCC ATCAGGCGAT GGCCGCCGCC
GAGCAACTGG CGGGCGAGGG CGTCTCGGCC GAGGTGATCG ACCTGCGCAC CGTCCAGCCC
TGGGACGAGG CGGCGGTGCT GGCGTCGCTG GCGAAGACCC ACCGGCTGGT GATCGCCCAT
GAGGCGGTCG AGGCGTTCGG CGTCGGCGCG GAGATCGCGG CGCGGATGGC GCAGATCGGC
TTCGACGAGC TGGACGGGCC GATCATGCGG GTCGGGGCGC CGTTCATGCC CGTGCCGTTC
GGGCGCGGGC TGGAGGTCGA TTACATGCCC TCGGCGGCGC GGATCGTCGA AGCGGTGCGG
GCGACCGATG TCTGA
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| Protein sequence | MSEARFAHAI NRALDDALAA DPSVLLLGED IANAGGTFAV TRGLLDKHGP DRVIDMPIAE
NAIAGMAVGL ALGGFRPVVE IMFMDFMTLT MDALVNQAAK LHFMFGGQSA VPMVVRTQHG
GGLNAGPQHS QCLEAWFAHI PGLKVVVPAT LDDAYALLRS AIDDPNPVLF VENKALYPMK
GALSDAPPAA PIGKARIARA GSDVTIVSYG AMVHQAMAAA EQLAGEGVSA EVIDLRTVQP
WDEAAVLASL AKTHRLVIAH EAVEAFGVGA EIAARMAQIG FDELDGPIMR VGAPFMPVPF
GRGLEVDYMP SAARIVEAVR ATDV
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