| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1035 |
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| Symbol | |
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| ID | 5196136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1152098 |
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| End bp | 1153024 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580580 |
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| Product | palmitoyl-CoA hydrolase |
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| Protein accession | YP_001261539 |
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| Protein GI | 148553957 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0725779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTACCG TCACCAACGA ACTCCACGAG CAGGCGCGGC AGGACCGGAT CGCCATGCTG
CGCCGGCTGA TCGACCGCAT GGGCCGGATC GCGCCCGCCG AGGGCGACGG CGACCGCTTC
CTGATCGAGC CGGCGATCGG CGCCTTCGAC CGGGTCTATG GCGGCCAGAG CCTCGCCGAG
GCGCTGATCG CGGCGGCGCG CACGGTCGAC CAGGGACGGC GGCTCAACTC CGCGCATTGC
TATTTCCTGC GGCTCGGCGA TCCGCGCAAG CCGGTCGTCT ATGTCGTCGA CCGGCTGCGC
GACACGCGCT CCTTCTCGGT CCGCCAGGTC CGCGCCGAGC AGGACGGGCA GGCGATCATC
ACCGCCACCT TCTCCTTCGC GGCGTCGTTC GGCGGGATCG AGCATCAGGG GCCGGCGGCC
GACGCGCCGC CGCCCGAGGA GGTGCTGCCG CGCGACGTGG CGCTGCTGGC GCGCAACGGC
GGCGAGCTGC CGAAGAATGC TGGGGTGCCC TGGCCGATCG ACCTGCGCCA TGTCGACCAG
CCGCCATGGG ATCAGCGGAT CGGCGACGGC CGCCACCGCG TCTGGATGCG CGCCGACGAG
GAGCTGCCCG ACGATCCGCT GCTCCACGCC TGCCTGCTGC TTTACGCCAG CGACCTGACC
ATGGCCGACG CGGTCACCAA CCAGCACCCG ATCGTCTGGG AGGACCTGAT CGCCGCGCGC
GGCCTGTTCG GCGCGTCGCT CGACCACGCC TTCTGGCTGC ACGTGCCGGC GCGGATCGAC
CAATGGCTGC TCCACGTCCA GGAATCGACC CGCGCCGCCG ATGGGCGGGG CTTCACCACC
GGCCGCTTCT ACGATCGGTC GGGCGTGCTG GTCGCGTCGG TGGCGCAGGA GATCTTCATC
AAGGACATGA GCGGAGGAAC GGCATGA
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| Protein sequence | MITVTNELHE QARQDRIAML RRLIDRMGRI APAEGDGDRF LIEPAIGAFD RVYGGQSLAE
ALIAAARTVD QGRRLNSAHC YFLRLGDPRK PVVYVVDRLR DTRSFSVRQV RAEQDGQAII
TATFSFAASF GGIEHQGPAA DAPPPEEVLP RDVALLARNG GELPKNAGVP WPIDLRHVDQ
PPWDQRIGDG RHRVWMRADE ELPDDPLLHA CLLLYASDLT MADAVTNQHP IVWEDLIAAR
GLFGASLDHA FWLHVPARID QWLLHVQEST RAADGRGFTT GRFYDRSGVL VASVAQEIFI
KDMSGGTA
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