Gene Swit_1025 details

Gene Information

• Locus tag: Swit_1025
• ID: 5198773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: +
• Start bp: 1142886
• End bp: 1143428
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640580571
• Product: hypothetical protein
• Protein accession: YP_001261530
• Protein GI: 148553948

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.848234
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.057955
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCGACC AGCCCGCCGC CGAAGCCCTC CAGGCGCTCC TCGACAAGCA GGCGGTGAGC 
GAGGTGCTGC TCGGCTATTG CCGCGCGATC GACCGCCGCG ACGCGGAGCT GATGCGGCGG 
GTCTACTGGC CCGAGGCGAT CGACGACCAC GCCGTGTTCC GCGGCGACGT CGAGCAATTC 
ATCGCCTACA GCTTCCCGTT CATGGAGGGC GTGGTCAGCC AGCACCGCAT CACCAACATC 
TGGGTCGACC TGACCGGCCC GGCCGAGGCC TTCTCCGAAT GCTATTTCTC GGGCTTCCAC 
GATTTCCCGG CGGAGGACGG CGGACGGCTC GAGCGGATCG TCGGCGGCCG CTATCTCGAC 
CGGCACGAGA AGCGCGGGCC GGAATGGCGG ATCATCGAAC GGACGCTGGT GATCGACTGG 
TATCATGAAC GTCCCGGCAA TTCGGTGTGG GACAGCGGCC GCTACGCCAA CCTCCCCAAC 
CGCGGCGCCG CGAAGCCCGA CGACCCGCTG TACCGGCTCC ACCCCTGGGG GACGCGGGTG 
TGA 

 

Protein sequence

MTDQPAAEAL QALLDKQAVS EVLLGYCRAI DRRDAELMRR VYWPEAIDDH AVFRGDVEQF 
IAYSFPFMEG VVSQHRITNI WVDLTGPAEA FSECYFSGFH DFPAEDGGRL ERIVGGRYLD 
RHEKRGPEWR IIERTLVIDW YHERPGNSVW DSGRYANLPN RGAAKPDDPL YRLHPWGTRV