| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0989 |
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| Symbol | |
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| ID | 5199734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1098719 |
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| End bp | 1101061 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580535 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261494 |
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| Protein GI | 148553912 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.220833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAT TCCTCACATC GGGTGCGAGC GATCGGGCGC TCGGCCTCGC GCTGGCTGGC
GCGGCGCTGC TCGCGGCGGC CCCGGCCGTC GCGCAGGAGG CATCCGGCAG TTCGGACACG
ATTGAAGAGA TCGTCGTCAC TGCCCAGAAA AGAAACGAGA ATATGCAGTC GACGCCGATC
GCGATCTCGG CCTTCACCGC CGACGCGATC AGCCGCAAGG GGCTGTCCGA CATCCAGCAG
GTGTCGCGCC TCGCGCCCAA CGTCTCGTTC GACTTCACCT CCCCGATCAG CGGCGCGTCC
AACGCGGCGT CGGTGTTCAT CCGCGGCATC GGCCAGCAGG ATTTCGCGCT GACCACCGAT
CCCGGCGTCG GCACCTATGT CGACGGCGTC TATGTCTCCC GATCGGTCGG CGGCGTGCTC
GACGTGCTCG ACATCGAGCG GATGGAGATC CTCCGCGGGC CGCAGGGGAC GCTGTTCGGC
CGCAACACGA TCGGCGGCGC CATCTCGATC ATCTCGAAGA TGCCGGAGAA GGAATTCGGC
GGCTCGCTCG AAGCCTCGCT CGGCAATTAT GGCCGCCGCT ATCTGCGCGG TTCGGTCAGC
CTGCCGCTCG GCCCCGACAC GGCGGTCCGT ATCTCGGTTT CCTCCAAGGA TAAGAACGGT
TTCGTCAAGT CTGCTTATAC ACCACAGCAG AAGTCGCTGC TCGGCGGAAC GCCGCTGACC
GACCTCGGCA ACGAGAACCG GCAGGCCGCG CGGATGGTGC TGGTCCATGA TTTTTCGGAC
CGGTTCAAGG CGACCCTGTC GGGCGACTAT AGCCGCCTGC GCGAGAACAA CGCCGCCGAC
CGGCTCGCCG GGATCACCGG CACGCTGGCG GACGGGCCGC TGGTCTTCGC CTACAACACG
TTCGGGTCGA CGCCCTCGGT CATCCCGGTG ATCGGCAACG ACCGCTACGT CCCGGCCAAC
TACATCACCG GCCGCGACCG GACCTATTCG ACCGGCCCGA ACGGCAGCAG CATCGACGCC
TGGGGCACCG CGCTGACGCT CGACTTCGAG GCGAGCGAGA GCCTGTCGAT CAAGTCGATC
ACCGCCTATC GCAAGACCAC CGGATCGTTC AACCGCGACG CCGACGGATC GCCGCTGGTG
ATCACCGAAA CCTCCAACTA CGGCTATCGC CACAAGCAGT TCACCCAGGA ATTGCAGGCG
GTCGGCGACG TCGCCGACGG CGCGGTCAAA TATGCCGCCG GCCTGTTCTA TTTCGACGAG
AAGGGATCGG ACCCGCTGGT CGTCCGCCTG CCCGAGGTGG TCGGCACCAT CTACCAGGAC
ATCGCCGACG TCCGGAACAA GAGCTACGCC GCCTATGCCC AGGCGACCTG GACGATCGTC
GACGGCCTGT CGCTGACCGC CGGCGGGCGC TACACCAAGG ACAGGAAGCG CTTCGTCTCC
GACCAGTATA TCGTCACCGG ATCGGCCTCG CCCTTCCTGT TCGGCGGCGC GCCGGCCGGC
ACGCTGATCC CGCTCGTGCC CCGCAACTCG GTCACCACCC AGTCGTTCGA GAAATTCTCG
CCGCGCGCGA GCGTCGACTA TCGGATCGGC GACGTGCTGG TCTACGGCTC CTACAGCAAG
GGCTTCAAGA GCGGCGGCTT CAACCTGCGC TACGTCGCGC CGCGCCCGTC GGTGCTGTCC
TTCGGCCCGG AAAACGCCAC CACCTTCGAG GTCGGCACCA AGATCGACGC GTTCGACCGC
AAGCTCCGCC TCAACCTCGC CGCCTTCACC ACCGACTATA AGGGCATCCA GGTCACCGTG
TTCGAGAATC TCGGCGCGCC GGTGACGCTC AACGCCGGCG ACGCGCGGAT CAAGGGGTTC
GAGGCGGAAC TGACCGCCAT CCCCCTCCCC GGCCTCGAGC TCACCGCCAA TCTCGGCTAT
CTCGACAGCC ACTACACTGC GATCCGCGCC AATCCGGCGC TGGTCAGCAC GCCCGAGCAG
ATCATCAGCC GCTCGACCCG CCTGCCCAAG GCGCCCGAAT GGCAGGGGAC GATCAGCGCC
GCCTACACCT ACACGCTGGG CAACGACGCC AGGCTCGACG CGCGGGCGGA CTTCCACTTC
TCGTCGCGCT ACGCCAACGA CGCGGTCAAC TCGCGCTTCC TCAACCAGAA GGCCTATCAG
ACGCTCGGCC TGTCGGCGGG CTACACCGCG CCCGACCGCC GCTGGTCGCT GCGCCTGTTC
GTCGACAACC TCACCGACGA GCGCTACATC GTCTCGGGCG ACAGCAATTA CGGCATCGGC
TTCCACGAAG CCAACTACAA CCGCCCCCGC GAATGGGGCG CGACGCTGGG CTTCAACTTC
TGA
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| Protein sequence | MKPFLTSGAS DRALGLALAG AALLAAAPAV AQEASGSSDT IEEIVVTAQK RNENMQSTPI
AISAFTADAI SRKGLSDIQQ VSRLAPNVSF DFTSPISGAS NAASVFIRGI GQQDFALTTD
PGVGTYVDGV YVSRSVGGVL DVLDIERMEI LRGPQGTLFG RNTIGGAISI ISKMPEKEFG
GSLEASLGNY GRRYLRGSVS LPLGPDTAVR ISVSSKDKNG FVKSAYTPQQ KSLLGGTPLT
DLGNENRQAA RMVLVHDFSD RFKATLSGDY SRLRENNAAD RLAGITGTLA DGPLVFAYNT
FGSTPSVIPV IGNDRYVPAN YITGRDRTYS TGPNGSSIDA WGTALTLDFE ASESLSIKSI
TAYRKTTGSF NRDADGSPLV ITETSNYGYR HKQFTQELQA VGDVADGAVK YAAGLFYFDE
KGSDPLVVRL PEVVGTIYQD IADVRNKSYA AYAQATWTIV DGLSLTAGGR YTKDRKRFVS
DQYIVTGSAS PFLFGGAPAG TLIPLVPRNS VTTQSFEKFS PRASVDYRIG DVLVYGSYSK
GFKSGGFNLR YVAPRPSVLS FGPENATTFE VGTKIDAFDR KLRLNLAAFT TDYKGIQVTV
FENLGAPVTL NAGDARIKGF EAELTAIPLP GLELTANLGY LDSHYTAIRA NPALVSTPEQ
IISRSTRLPK APEWQGTISA AYTYTLGNDA RLDARADFHF SSRYANDAVN SRFLNQKAYQ
TLGLSAGYTA PDRRWSLRLF VDNLTDERYI VSGDSNYGIG FHEANYNRPR EWGATLGFNF
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