Gene Swit_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0985 
Symbol 
ID5196427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1094685 
End bp1095158 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID640580531 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001261490 
Protein GI148553908 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.228113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG AACTCGATGC GTTCGATCGC AAGATATTGG CGCTGCTCCA GGAGAATGCC 
GACCAGTCGA CCGCCGAGAT CTCCGAGGCG GTCGGCCTGT CGCCGTCGCC CTGCTGGCGG
CGCATCCAGC GGCTCCGCGA GGAAGGCTAT ATCAAGGCGC AGGTCGCGCT GGTCGACCGG
CGCAAGATCG GGCTGAACAC GCAGGTGTTC GCGCAGGTCA AGCTCAACGC CCATGGCCGG
TCGCATCTGG AGGAGTTCAG CGACGCGATC CGGGGCTTTG CCGAGGTGCT CGACTGCTAC
GTCACCATGG GGCCGACGGA CTTCCTGCTG CGCATCGTCG CCGCCGACAT CGACGCCTAT
GAGCGTTTCT TCTTCGACAA GCTGTCGCGG GTGCCGGGGG TACAGGAGAT CAATTCGATC
GTCGCGCTGT CGGAGATCAA GTCGACCACC GAGCTGCCAT TGACCGCGGT CTGA
 
Protein sequence
MAAELDAFDR KILALLQENA DQSTAEISEA VGLSPSPCWR RIQRLREEGY IKAQVALVDR 
RKIGLNTQVF AQVKLNAHGR SHLEEFSDAI RGFAEVLDCY VTMGPTDFLL RIVAADIDAY
ERFFFDKLSR VPGVQEINSI VALSEIKSTT ELPLTAV