| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0981 |
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| Symbol | |
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| ID | 5197263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1089592 |
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| End bp | 1092015 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580527 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261486 |
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| Protein GI | 148553904 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATT CGAACGGAAC CGCGCGGCGC ATGGCGATCA TCGCCACCTT GTGCGCCTCG
ATCGCCTTGC CCGCGACGGT GCAGGCGCAG ATGCAGACGC AGGCCACCCA GCCCGGCGAC
GGGGCATCCG AGGGGAGCGC GGGCGCCGAT CCGCTGATGA ACGACATCGT CGTGACCGCG
CGGCGGCGGA GCGAGACGGC GCAGAGCGTT CCGCTCGCCA TCTCCGCCTT CTCGGCGGAA
TCGATCGAGG CGCGGGGAAT CCAGAAGATC GACGGCCTCG CCGGCTTCAC CCCCAACATG
ACCTTCCAGA ACAACCCCAG CTTCGGCGGG GCGGGATCGT CCGCCGCCAT CTATATCCGC
GGCATCGGCC AGAAGGAGTT CCTGCCGACC ACCGAGCCCG GCGTCGGCGT CTATGTCGAC
GGCGTCTATG TCGCCCGGTC GGTGGGGGCG CTGCTCGACC TGGTCGACAT CGACCGGGTG
GAGATATTGC GCGGGCCGCA GGGGACGCTG TTCGGCCGCA ACACGATCGG CGGCGCGATC
AGCATCACCA CCCGCAAGCC GGGCGACCAG CCCTATGCCA ATGTCCAGCT CACCACCGGC
CGCTACAGCC GGATCGACGT GAAGGCGGTG GGCAACCTGC CGCTCACCGA GACGCTGTTC
ACCAAGCTCT CGGTCGCCTC GTTCAACCGC GACGGCTATG TCCGCCACCT GTCCGACGGC
CGCAAGCTCG GCAATGTCGA CACGCTGACC GGGCGGCTCG ACCTGCGCTG GCTGGCGGGC
GACGGGCTGG AGATCAACCT GGCGGTGGAG GGGACGCGCG ACCGGTCGAA CGGGCCGGCC
CTGGTCCTTG CCGGGGTCAA CTATGGCTCG GCGATCTTCA ATCCGGACCA ATTGCCGATG
CTCCCGCCGG GCAGCCCGGC GACGCCCGGC GCCTATGTGC TGAACCCGCC GTTCGATGCT
CCGACCGACA ATTTCACCTT GCTCCACAAT TATTTCGCCA CGCTGCTGGG CGGCCAGCCC
TGCCTGGGCT TCGCGCCCTA CAGCCCGCAG GGCAGCGCCG CCGCCTGCTT CGGCGACCGC
TTCGTCGTCG GGCGGAAAGC CGATGCGGGA ACCGGCGCGC AATATTCCAG GAACGACCTC
TGGGGCACCC AGGCGATCGT CGACTGGGAC GTGGGGCCGG TCCAGCTCAA GTCGATCACC
GCCTATCGCG AGGTCGACGG GACATATGCC CGCGACGGCG ATCATTCGCC CTTCACCATC
CTGCATTTCG CCGACGTGCT GAAGCAGAAG CAGTTCAGCC AGGAAGTGCA ACTGCTCGGC
GCGACGGCGG ACCGGTCGCT CAAATATGTC CTCGGCGCCT ATTATTTCCG GGAGAAGGGC
AACAACATCA ACACGCTGGA CTTCACGCCG GTGATGTTCC GCTCGGGCGG CCGCTTCGAC
ACCGAAAGCT ATGCCGCCTT CGGCCAGACG ACCTGGTCGC CGCTCTCGGT CGTCGACCTG
ACGGTCGGCC TGCGCTACAC CCGGGATCGC AAGTCCTTCC TGCCCGACCA GGAGATATTG
GTCGACAAGA CCGGCGGGGC GCTGATCGCG GCCAGCCCCA ACACGCCGCA GACCCGGGTG
CTGCCCTTCG CCACGGTGAA GCGCGTCGAG GAGGCGGTCA CGCCCAGCGT CAACCTCGCC
TGGAAGGCGG CCGACGACAT CCTCGCCTAT GCGTCCTTCT CCAAGGGGTT CAAGAGCGGC
GGCTTCGTGC AGCGGGTCTT TCCCGCGCAG GCGACGGTGC CCGAATTCGG CGCCGAAAAG
GCGGAAGCCT ATGAGCTCGG CTTCAAGTCG CGCCTGTTCG ACCGGCGGCT GACGCTCAAC
GGCGCGATCT TCCTGACCCG CTATGACGAT CTGCAGGTGC AGGTCTTCAC CGGGATCGCG
CCGGTGACGA AGAATGCCGC GTCGGCGGAG ATCCGGGGCG CCGAGCTGGA AGGGCGCTTC
TCGGCGGGCG ACGGCTGGTT CCTCGAAGCC AGCCTCGGCT ATCTCGATCC GAAGTTCACC
AAGGTCGATC CCGCCGCGAC CGAGATCACC CGCGCGTCGA AGTTCGAGCG GGTGTCGAAA
TGGACGCTCA GCGGATCGCT GTCCAAGCGC ATCGGCCTGG CCAATGGCGG CAACGTCGTC
GGCCGGATCG ACTGGTCCTA CCGGTCGGGC GCCTTCATGG ACGCGCTCAA CTCGCCCCAA
CTCTATCAGC CGGGCTACAG CCTGTTCAAC GCCAACCTGA CCTACAACCT GCCCGGCGAT
GCGATCTCGC TGTTCGCGGC GGTCAACAAC CTGACCAGCA AGACCTATCT GCAGACCGGC
GTCTACGGAT CGTCCTTCGG GCTTTACGAG CATATGTACG CCCGGCCGCG CGAATGGTCG
GCGGGCGTCC GCTGGGCGCT GTGA
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| Protein sequence | MTNSNGTARR MAIIATLCAS IALPATVQAQ MQTQATQPGD GASEGSAGAD PLMNDIVVTA
RRRSETAQSV PLAISAFSAE SIEARGIQKI DGLAGFTPNM TFQNNPSFGG AGSSAAIYIR
GIGQKEFLPT TEPGVGVYVD GVYVARSVGA LLDLVDIDRV EILRGPQGTL FGRNTIGGAI
SITTRKPGDQ PYANVQLTTG RYSRIDVKAV GNLPLTETLF TKLSVASFNR DGYVRHLSDG
RKLGNVDTLT GRLDLRWLAG DGLEINLAVE GTRDRSNGPA LVLAGVNYGS AIFNPDQLPM
LPPGSPATPG AYVLNPPFDA PTDNFTLLHN YFATLLGGQP CLGFAPYSPQ GSAAACFGDR
FVVGRKADAG TGAQYSRNDL WGTQAIVDWD VGPVQLKSIT AYREVDGTYA RDGDHSPFTI
LHFADVLKQK QFSQEVQLLG ATADRSLKYV LGAYYFREKG NNINTLDFTP VMFRSGGRFD
TESYAAFGQT TWSPLSVVDL TVGLRYTRDR KSFLPDQEIL VDKTGGALIA ASPNTPQTRV
LPFATVKRVE EAVTPSVNLA WKAADDILAY ASFSKGFKSG GFVQRVFPAQ ATVPEFGAEK
AEAYELGFKS RLFDRRLTLN GAIFLTRYDD LQVQVFTGIA PVTKNAASAE IRGAELEGRF
SAGDGWFLEA SLGYLDPKFT KVDPAATEIT RASKFERVSK WTLSGSLSKR IGLANGGNVV
GRIDWSYRSG AFMDALNSPQ LYQPGYSLFN ANLTYNLPGD AISLFAAVNN LTSKTYLQTG
VYGSSFGLYE HMYARPREWS AGVRWAL
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