| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0943 |
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| Symbol | |
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| ID | 5199872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1053835 |
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| End bp | 1056759 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580489 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001261448 |
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| Protein GI | 148553866 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.535106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC CTTTCCGCCT CGCCGCTGGC GGGCTGGTCG ATCGCGGCCG GCCGCTGTCC
TTCCGCTTCG AGGGGCGCGA CTATCGCGGC TATGCCGGCG ACACGCTCGC CTCCGCGCTG
CTCGCCAACG GCGTTCGGCT GGTCGGCCGA TCGTTCAAAT ATCATCGCCC GCGCGGGATA
TTGGGGTTCG GACCCGAGGA ATCCAACGCG CTGATGCAAC TCGGCACCGG CGCGCGCACC
GCGCCCAATC TGCGCGCCAC CGAGATCAGG CTGCACGACG GTCTGGAAGC GAAGGCGGTC
AATTGCTGGC CGAGCGTCCG CTTCGACGTC GGCGGGGTGA ACAACCTGCT GTCGCGCTTC
CTGGCGGCGG GTTTCTACTA CAAGACCTTC ATGTGGCCGC ACTGGCACGT CTATGAGGGC
GTGATCCGGC GGGCGGCCGG CCTCGGCAAG GCGCCCAAGG CCGCCGATCC CGACCGCTAC
GAGAACCGCT TCGCCCATTG CGACCTGCTG GTGGTCGGAT CGGGCCCCGC CGGCCTCGCC
GCGGCGCGGG CGGCGGCCGG CAACGGCCAG CGGGTGATCC TGGCCGAGCA GGATCATGTG
CTGGGCGGCC GGCTGCGCTG GGAGGGCGGC GAGATCGACG GCCTGGCCGC CGATCGCTGG
GCCGACGAGG CGATCGCGGC GCTGGCCGCG ATGCCGAACG TCCGCATCCT GCCGAGCACC
GCCGTCACCG GCTATTTCGA CCATGACGCG CTGGCGATGA TCGAGGCGGT GTCGGGCGAC
GATCCCGCCG CCCCGGCGCA CCTGCCGCGC TACCGGCAAT GGCAGGTGCG GGCGGGCAGG
GTGGTCCTCG CCACCGGCGC GATCGAGCGG CCGCTGGTGT TCCCCGGCAA CGACCGGCCC
GGCGTCATGC TGGCGAGCGC GGTGCGCCAT TATCTGGCGC GCTACGGCGT CCGCGCGGGT
GATCGGGCGG TGATCTTCAC CAACAATGAC GAGGCCTATC GCACCGCCGT CGCCTTCCGG
GCCGCCGGGG GCACGGTGGC GGCGGTGGTC GACACGCGGG CCGACGTCGA CACGGCGGTC
GCGGCCTCGG TCGAGACGCT CGGCATCCCG TTGCTGCGCG GCGCGTCCGT GGTGGCGACG
CGGGGCGCAA AGGCGTTGCG CGAGGTGACG GCCCGGCAGG CGGACGGCGG CACGCTGCGC
CTCGCCTGCG ACCTGCTGGC GATGTCGGGC GGCAGCAACC CGAATGTCGG CCTCTTCTCC
CAATCGGGCG GGCGGCTCGC CTTCGACGAG GAACTGACCG CCTTCCGCCC CGCCCAGTCG
GTGCAGAACG AACGGTCGGC CGGCGCCGCC GCCGGGCTGC GGACGCTGGA CGGGGCGCTG
GCGAGCGGCC ATGCCGCCGG AACGGGCGAC GGCGACGGCG CCGCGCCGCG CGCGACCGAC
GCGCATCCGG CGCCGGCCGT CACCGCCTGC TGGCGGATCG ACGCGCCGGG CAAGGCCTTC
GTCGACATGC AGAACGACGT CAGCGCCGAC GATATCGGCC TTGCCGCGCG CGAGAGCTTC
CGCTCGGTCG AGCATCTCAA GCGCTACACT ACGCTCGGCA TGGCGTCCGA CCAGGGCAAG
ACCTCCAACG TCAACGCGCT GGCGATCATG GCCGGGCTGA CCGGGCAGGG CATCGCCGAG
ACCGGGACGA CGCGCTTCCG CTTCCCCTTC GTGCCGGTCG CGCTCGGCGC CTTCGCCGGC
CGCGCCCATG GCGAATTGCT GCGGCCGCTG CGGCGGCTGG CCCTGCACGA CCGCCATGTC
GCACTGGGAG CGATCATGGA GGATTATGGC TGGCTCCGCC CGTCGGCCTA TCCCCGCGCT
GGCGAGAGCC GGTTCGAGGC CGAGCAGCGC GAGGCGCGGG CGGTGCGCGA CGGGGTCGGC
ATCTTCGACG GCTCGCCGCT CGGCAAGATC GAGGTGCGCG GCCCCGACGC GGGCAAGCTG
CTCGACTTCA TCTATGCCAA TACCATGTCG ACGCTGAAGC TCGGCAAGGT CCGCTACGGG
CTGATGCTCA ACGAGCTGGG GGTCGTCATC GACGACGGCG TCTGCGTCCG GCTGGGCGAG
GACCATTTCC TGGTCGGCGC GTCGAGCGCC GGCGCGGACC GGATCGCCGC CTGGCTGGAG
GAATGGCTCC AGTGCGAGTT CGTCGACCAT GACGTGCTGG TCGCTCCCTT GACGACGAGC
TGGTCGGTGG TGACGCTCAC CGGCCCGCGC GCCCGCGACC TGCTCGCCGA GGCGGGGACG
AGCTTCCCGC TGGGGGCCGA GGCCTTCCCG CACATGAGCT TCCAGGCCGG CACCGTCGCG
GGGATCGAGG CGCGGGTCAT GCGGGTGAGC TACACCGGCG AGACCTCCTA TGAGATCAAC
GTGCCGACCG GCCGCACCGC CGAGCTGTGG GACGTGCTGA TGCGGCTCGG TGGCCGATAT
GGGCTGACCC CGATCGGCAT CGACGCGTGG AACCTGCTGC GCCTCGAAAA GGGCTATCTG
CACATCGGCG CCGATACCGA CGGCACCACG ACGCCGCTCA ACATCGGCTG GGACCATGTC
CTGCGGCGCA AGGGAGACTT CGCCGGCAAG CGTTCGCTGA TGCTCGCGCT GCACCAGGAC
CCGGCGCGGC TCCAGCTCGT CGGGCTGCGC GCGGAGGGTA TGGAGCCGCT GCCGATCGGC
GCGCATCTGG TTCGTGGCGA GGGGGCGGAT CGCGCCAGCG ACGGCTTCGT CACGTCGAGC
GTCCATAGCC CGGTGTTCGG CCGGGGCGTC GCGCTGGCGC TCGTCCATGG CGGCACCGGC
CGGGTCGGGG AGACGGTCGC GCTGGAGCAT GGGGGGCGCC GGCTGACCGC CACGATCGTC
CAACCCACCC TCTATGATCC CGAAGGAGCG CGGCTCAATG GCTGA
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| Protein sequence | MSQPFRLAAG GLVDRGRPLS FRFEGRDYRG YAGDTLASAL LANGVRLVGR SFKYHRPRGI
LGFGPEESNA LMQLGTGART APNLRATEIR LHDGLEAKAV NCWPSVRFDV GGVNNLLSRF
LAAGFYYKTF MWPHWHVYEG VIRRAAGLGK APKAADPDRY ENRFAHCDLL VVGSGPAGLA
AARAAAGNGQ RVILAEQDHV LGGRLRWEGG EIDGLAADRW ADEAIAALAA MPNVRILPST
AVTGYFDHDA LAMIEAVSGD DPAAPAHLPR YRQWQVRAGR VVLATGAIER PLVFPGNDRP
GVMLASAVRH YLARYGVRAG DRAVIFTNND EAYRTAVAFR AAGGTVAAVV DTRADVDTAV
AASVETLGIP LLRGASVVAT RGAKALREVT ARQADGGTLR LACDLLAMSG GSNPNVGLFS
QSGGRLAFDE ELTAFRPAQS VQNERSAGAA AGLRTLDGAL ASGHAAGTGD GDGAAPRATD
AHPAPAVTAC WRIDAPGKAF VDMQNDVSAD DIGLAARESF RSVEHLKRYT TLGMASDQGK
TSNVNALAIM AGLTGQGIAE TGTTRFRFPF VPVALGAFAG RAHGELLRPL RRLALHDRHV
ALGAIMEDYG WLRPSAYPRA GESRFEAEQR EARAVRDGVG IFDGSPLGKI EVRGPDAGKL
LDFIYANTMS TLKLGKVRYG LMLNELGVVI DDGVCVRLGE DHFLVGASSA GADRIAAWLE
EWLQCEFVDH DVLVAPLTTS WSVVTLTGPR ARDLLAEAGT SFPLGAEAFP HMSFQAGTVA
GIEARVMRVS YTGETSYEIN VPTGRTAELW DVLMRLGGRY GLTPIGIDAW NLLRLEKGYL
HIGADTDGTT TPLNIGWDHV LRRKGDFAGK RSLMLALHQD PARLQLVGLR AEGMEPLPIG
AHLVRGEGAD RASDGFVTSS VHSPVFGRGV ALALVHGGTG RVGETVALEH GGRRLTATIV
QPTLYDPEGA RLNG
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