| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0885 |
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| Symbol | |
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| ID | 5199067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 976269 |
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| End bp | 976916 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580431 |
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| Product | pyroglutamyl-peptidase I |
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| Protein accession | YP_001261390 |
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| Protein GI | 148553808 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.757223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACCG CCATCGTCAC CGGCTTCGGT CCCTATCTCG AAGAGGCCGA GAACCCCAGC
GGCGCCATCG CCCAGGCCAT CCATGGAACC GAGAAGGACG GGGTTCGCAT TCATGGCCTG
GTCCTGCCGG TCAGCGCCGG CGCGGTGCGG GCGTTGCTGG AGGAAGAGGT GCGAAGGCTC
CGTCCGGACG TGCTGATCGT CACCGGCGTG ACGCGGGGAC GCGCCGCCGT GGCCGCCGAG
CGGGTGGCCA TCAACGTCAT GGATTTCCCG ATCCCCGACG TCGACGGACG GGCGTTCATA
GACGAAGCCA TCGTCGATGG CGGGCCCGCG GCCTATTTCT CCACCCTTCC GATCAAGGCG
ATAGCGAAGG CCTGGAGGGA CCGGGACATC CCCGCCTATG TCTCGAACAC GGCGGGCACC
TATTTGTGCA ACCAGACCTT CTATCTGGCC TGCCATCTCG CATCCTCGCG CCCGATGCGG
GCGGGCCTCG TCCATATTCC CCTCTCGTCG GCACATGCGG CGGCGAGCCC GACGCCCGTT
CCCTCGCTGG CGTTGGAGAC CATGTACGAG GCCGTTCTGA CCGCCGCCCT GATATCGGCC
AATCATGAAG GTGCCGACCT GAAGCTGGAG GGAGGCCTGA CGTGCTGA
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| Protein sequence | MKTAIVTGFG PYLEEAENPS GAIAQAIHGT EKDGVRIHGL VLPVSAGAVR ALLEEEVRRL
RPDVLIVTGV TRGRAAVAAE RVAINVMDFP IPDVDGRAFI DEAIVDGGPA AYFSTLPIKA
IAKAWRDRDI PAYVSNTAGT YLCNQTFYLA CHLASSRPMR AGLVHIPLSS AHAAASPTPV
PSLALETMYE AVLTAALISA NHEGADLKLE GGLTC
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