| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0882 |
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| Symbol | |
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| ID | 5197201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 973426 |
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| End bp | 974871 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580427 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001261387 |
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| Protein GI | 148553805 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.455086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.852279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCT CCAATTTCTG GTTATATCGA ATCATTCTCG ATAGCTCTAA GATATATCTT
GAAAGAGTTT TTGCAAGAGA CTTTCCGCGC CCCCTGTCCG GCCCGCGATC ACGCCCCTAT
ATCGTCGCGA TGGCCGACCT TTTTGCGCCC GACCCCGCCG CTGGCTCCGC CTCCGCCGAC
GCAGCGCCGC TCGCCGAACG GCTGCGGCCG CGCACGCTGG CGGACGTGAT CGGGCAGGAA
CATCTCACCG GCCCCGAAGG CGCGATCGGC CGCATGGTCG CGGCGGGCCG CCTGTCCTCG
CTGGTGCTGT GGGGGCCGCC CGGCACCGGC AAGACGACGA TCGCGCGGCT GCTCGCCGAT
GCGGTGGGGC TGCGCTTCGC GCCGGTCTCG GCGGTCTTCT CGGGCGTCGC CGACCTCAAG
AAGATCTTCG CCGAGGCGCG CGAGCATGCG CGGATCGGCA CCCGCACGCT GCTGTTCGTG
GACGAGATCC ACCGCTTCAA CCGCGCCCAG CAGGACAGCT TCCTGCCCTA TGTCGAGGAC
GGCACCGTGG TGCTGGTCGG CGCGACCACC GAAAATCCCT CGTTCGAGCT CAACGCGGCG
TTGCTCAGTC GCGCGCAGGT GCTGATCCTC AACCGGCTCG ACGCCGCCGC GCTCGGCAAG
CTGATCGCGC GCGCCGAGGA GATCGAGGAG CGCGCCCTGC CCCTGACCGA GGGCGCGCGC
GAGGCGCTGG TCGCCTCGGC CGACGGCGAC GGCCGCTTCC TGCTCAACCA GGCCGAGACG
CTCTTCTCGA TCGCGATCGA TCATCCGCTC GAACCGGGCG AACTGGCCGC GCTGCTCCAC
CGGCGGATGG CGGTCTACGA CAAGGACCGC GAGGGGCATT ACAACCTCAT CTCCGCGCTC
CATAAATCGC TGCGCGGATC GGACCCGCAG GCCGCGCTCT ACTATCTCGC GCGGATGCTG
ACGGCAGGCG AGGAGCCGCT CTACGTGCTG CGCCGGCTGG TCCGCTTCGC CAGCGAGGAT
ATCGGGCTCG CCGATCCGCA GGCGCTGGTC CAGTGCCTCG CCGCCAAGGA CGCCTACGAC
TTCCTCGGCT CGCCCGAGGG CGAACTGGCG ATCGTGCAGG CCTGCCTCTA TCTGGCGACC
GCGCCCAAGT CGAACGCGGC CTATGCCGCG CAGAAGGCGG CGTTCCGGTC GGCGAAGGAC
ACCGGTTCGC TGATGCCGCC GAAGAATATC CTCAATGCGC CCACCAGGCT GATGAAGGAC
GTCGGCTACG GCAAGGGCTA TGCCTATGAC CATGACGCCG AGGACGCCTT CTCGGGCGAC
GATTATTGGC CCGAGGAAAT GGCGCCGCAG AGCTTCTACG TCCCCTCCCC GCGCGGCTTC
GAGGCGAAGA TCGCCGAGCG GATCGCCTAT TGGGACCGAC TGCGGCAGGA GCGCGGCGGC
AAATGA
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| Protein sequence | MSFSNFWLYR IILDSSKIYL ERVFARDFPR PLSGPRSRPY IVAMADLFAP DPAAGSASAD
AAPLAERLRP RTLADVIGQE HLTGPEGAIG RMVAAGRLSS LVLWGPPGTG KTTIARLLAD
AVGLRFAPVS AVFSGVADLK KIFAEAREHA RIGTRTLLFV DEIHRFNRAQ QDSFLPYVED
GTVVLVGATT ENPSFELNAA LLSRAQVLIL NRLDAAALGK LIARAEEIEE RALPLTEGAR
EALVASADGD GRFLLNQAET LFSIAIDHPL EPGELAALLH RRMAVYDKDR EGHYNLISAL
HKSLRGSDPQ AALYYLARML TAGEEPLYVL RRLVRFASED IGLADPQALV QCLAAKDAYD
FLGSPEGELA IVQACLYLAT APKSNAAYAA QKAAFRSAKD TGSLMPPKNI LNAPTRLMKD
VGYGKGYAYD HDAEDAFSGD DYWPEEMAPQ SFYVPSPRGF EAKIAERIAY WDRLRQERGG
K
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