Gene Swit_0858 details

Gene Information

• Locus tag: Swit_0858
• ID: 5196717
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: +
• Start bp: 953089
• End bp: 953649
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640580403
• Product: hemerythrin HHE cation binding domain-containing protein
• Protein accession: YP_001261363
• Protein GI: 148553781

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCCGGGCA AATATGGTTC GCGCAACGCA CAGGGGAAGC ACCGGATCGC CAAGGACGAT 
CCGCTGGCGA TCAGCCTGCT CAAGGAGGAG CACCACACCT TCCGCACCCT GTTCGACGAG 
GCGGAGAAGG CCCGTCCCGA CCGCCTCGTC GCCATCGCGC GCGAGCTGTG CATGCGGCTG 
ACCGTGCACA TGGCGATCGA GGAGGAGATC CTCTACCCCG CGCTCAAGCC CGTGATCGGC 
GGCGACGAGG TCAACGAGGG CATCGTCGAG CATCAGTCGG GCAAGCGCAT CATCGCCGAA 
CTGGAGCAAC TCGACGGCAC CGAAGAGCTA TTCGCCTCGA AGGTCCACGT CCTGGGCGAG 
GAGACCGTCC ACCATATCGA CGAGGAAGAC GAGGATCTGT TCGAGGATGC CCGCGCGGCC 
GGTGAGAAAG GCGGGATCGA CCTCGACGCG CTGGGCGGGA AGCTCCGGTC GCGCCAGGCC 
GAGCTCTACA ACCAGATCAT GGCGACCGGC GAGACCGGCA AGACCTGCGA GGCGCAGCCC 
GACGAGGTCG AGCGCGCCTG A 

 

Protein sequence

MPGKYGSRNA QGKHRIAKDD PLAISLLKEE HHTFRTLFDE AEKARPDRLV AIARELCMRL 
TVHMAIEEEI LYPALKPVIG GDEVNEGIVE HQSGKRIIAE LEQLDGTEEL FASKVHVLGE 
ETVHHIDEED EDLFEDARAA GEKGGIDLDA LGGKLRSRQA ELYNQIMATG ETGKTCEAQP 
DEVERA