| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0856 |
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| Symbol | |
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| ID | 5196327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 950678 |
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| End bp | 951997 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580401 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001261361 |
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| Protein GI | 148553779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.63192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAA ACACCGAACA TACGCTGAGC GGCACGACGC CGCGCCGGCG CCCCAAGCCC
GAGGTCCTCG AGATCGGCGG CCACAAGCTC AAGCCTTCGA CCCTGATGAT GGGCCACGGC
TATGACCCGA TGCTTTCGGA AGGCGCGCTC AAGCCGCCGA TCTTCCTGAC CTCCACCTTC
GTCTTCGAGA ATGCCGCCGC CGGCAAGCGC CATTTCGAGG GCGTCACCGG CAAGCGGCCG
GGCGGGGCCG AGGGCCTGGT CTATTCGCGC TTCAACGGCC CGGACCAGGA GATATTGGAG
GATCGGCTCG GCATCTGGGA GGATGCGGAG GACGCGCTGA GCTTCTCCAG CGGCATGTCG
GCGATCGCGA CGCTGCTGCT CAGCCTGGTC CGCCCCGGCG ACGTGATCGT CCATTCGGCG
CCGCTCTATG CCGCCACCGA GACGCTGATC GCCCGCATCC TCGGCCGGTT CGGCGTGTCG
TGGCTCGACT TCCCGGCCGG CGCGACGCCG GAGGAGATCG AGACGGTGAT CGCGGCGGCC
AAGGCGAAGG GGCGGGTCGC GCTGATCTAT CTGGAAAGCC CCGCCAATCC GACCAACGCG
TTGGTCGACG TGCAGGCGGT CCGCGACGTG CGCGACCGGC TGTTCGCCGG CGAGGACGAG
AAGCCGCCGA TCGCGATCGA CAACACCTTC CTCGGCCCGC TCTGGTCGAA GCCGCTGCGC
CACGGCGCCG AACTGGTGGT CTATTCGCTG ACCAAATATG CCGGCGGGCA CAGCGACCTG
GTCGCCGGCG GCGTGGTCGG CGCCAAGGCG CTGCTCGATC CGGTCCGCGC GATGCGCAAC
ACGATCGGCA CGATCACCGA TCCCAACACC GCCTGGATGC TGCTGCGCTC GCTGGAGACG
CTCGAACTCC GGATGAGCCG CGCGGGCGAG AACGCCGCCA AGGTCTGCGA ATGGCTGCGC
GGCCAGCCGC AGGTCGACCG GGTCGGCTAT CTCGGCTTCC TCCAGCCCGG ATCGCGCCAG
GCCGACATCT ACCAGCGGCA TTGCGACGGC GCGGGATCGA CCTTCTCGCT CTACCTGAAG
GGCGGCGAGC GGGAGGCCTT CGCCTTCCTC GACGCGCTCA GGATCGCCAA GCTGGCGGTC
AGCCTGGGCG GGACCGAGAC GCTGGCCAGC CATCCCGCCG GCATGACCCA CCTGTCGGTG
CCCGAGGAGC GCAAGCGCGC GCTCGACATC GGCGACAACC TCGTCCGCAT CTCGATCGGC
ATCGAGGACC CGGACGACCT GATCGCCGAT TTCGAACAGG CGCTTCGCGC GATCGGCTGA
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| Protein sequence | MPKNTEHTLS GTTPRRRPKP EVLEIGGHKL KPSTLMMGHG YDPMLSEGAL KPPIFLTSTF
VFENAAAGKR HFEGVTGKRP GGAEGLVYSR FNGPDQEILE DRLGIWEDAE DALSFSSGMS
AIATLLLSLV RPGDVIVHSA PLYAATETLI ARILGRFGVS WLDFPAGATP EEIETVIAAA
KAKGRVALIY LESPANPTNA LVDVQAVRDV RDRLFAGEDE KPPIAIDNTF LGPLWSKPLR
HGAELVVYSL TKYAGGHSDL VAGGVVGAKA LLDPVRAMRN TIGTITDPNT AWMLLRSLET
LELRMSRAGE NAAKVCEWLR GQPQVDRVGY LGFLQPGSRQ ADIYQRHCDG AGSTFSLYLK
GGEREAFAFL DALRIAKLAV SLGGTETLAS HPAGMTHLSV PEERKRALDI GDNLVRISIG
IEDPDDLIAD FEQALRAIG
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