| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0836 |
|---|
| Symbol | |
|---|
| ID | 5197694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 932490 |
|---|
| End bp | 932885 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640580380 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001261341 |
|---|
| Protein GI | 148553759 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.496581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGATA TCGACAAGGC TTTTCGCCTG CGGCCGATCG AGGACGACTA TGGCTTTTCG
CAGGCGGTCC GCGCCGGCGA TTTCCTGTTC ATCTCGGGCA GCGTGAGCTG GGACAATGAC
GGCACCCCGA CCAATGTCGG CGACATGGGC GCGCAGATGC GTTCGATCTA CGTCGATATC
GGCAAGACGC TGAAGCATCA CGGCCTCGAC CCGACCGACA TCGTCAAGGA GACGATCTAC
GTCACCGACA TGGACAAGTT CTTCGAAGGC GCGCAGGCGC GGGCGGACTT CTACCAGGGT
GTCGTCCCGC CGGCCGCGAC CGGGGTCGAG ATCAACCGGC TCGTCAACAC CGATTTCATG
ATCGAGATCG AGGCGATCGC CTATTTCAAC CGCTGA
|
|---|
| Protein sequence | MVDIDKAFRL RPIEDDYGFS QAVRAGDFLF ISGSVSWDND GTPTNVGDMG AQMRSIYVDI
GKTLKHHGLD PTDIVKETIY VTDMDKFFEG AQARADFYQG VVPPAATGVE INRLVNTDFM
IEIEAIAYFN R
|
|---|
| |