| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0812 |
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| Symbol | |
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| ID | 5196765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 901484 |
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| End bp | 903826 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580356 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261317 |
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| Protein GI | 148553735 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.724428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA GGAGCAACCG CGTCGCGATC ATCGCGCTGG CGCTGAGCGG CGCGGCGTTC
TTCGGGGGGG TGCCGGCGGT CGCGGCGACG GCCGATGCCG GGGTTCAGGC AGAGCCCGAA
GGCGCCGACA TCATCGTCAC GGCGCGGCGG CGCGAGGAAA CGCTGCAAAG CGTGCCGATC
GCCGTCTCTG CGATATCCGC CGCCACGCTC GAACGCCGGC AGATCGATTC CGTCGCGCAG
GTCGGCGAAG CCATTCCCAA CATGACCTAC CAGACCGGCG CGCCGACCGG CACCGGGGCG
TCGACGCCGT CGGTGTTCAT CCGCGGCATC GGCTCGGCCG AAACCAGCCT CGGCACCGAA
CCTGGCGTCG GCCTCTATGT CGACGATGTC TATATCGCGC GCAGCGTCGG CAGCGTGCTC
GACCTGGTGT CGGTGGATTC GGTGCAGGTG CTGCGCGGCC CGCAGGGAAC CTTGTTCGGC
CGGAACAGCC TGGGCGGCGC GATCCTGATC CGCAGCCGCC GGCCGGCCGA TCGCCTCTCG
GGCTCGGTCG AGCTGAAGAC CGGGCGCTAC GACCGCGCCG ACATCCGGGC ATCGCTCGAC
GTCCCGCTGT CGGACACGCT GCGCACGAGC CTGTCCGGCA TGCGCGAGCG CCGGGACGGC
TATGTCCGGA ATCTCGACGG CGACAAGGCG AACGGCAACA TCCATCGCGA GGCCGCGCGG
TTCGTCGCCG AATGGCAGGC GAGCGACATG CTGAAGATCG ACGTCAACGC CGACATGACG
CGCATCCGCG AGAGCGCGCC GCCCTCGGTG CTGCTCGGCC TGGTGCCGAC CATTCCGGGC
ACGCCGGTGC CGAGCTCGAT CCAGGAGATA TCGAACCTCC AGGCGGGCTG TTTCGGCGGA
AGCGTGCTCG CCGACAGCGG CAATCCGCGC TGCATCGACC AGGGCGCCAT CCTCGGCCCG
TTCCGCACGC TCGGCGGCTA TTCGACCGAC AACGCGATCT TCGACAGCCA GGGCAGCCGC
CCGTTCGGCA ACGCTTCCCG GATCGACATC CGGGGCGTGA GCGGCCGTCT CGAATGGACC
CTGAGCCCCG AGCTCAGCTT CAAGTCGATC ACCGCCTATC GCACGCTCGA CGCCTTCTGG
ACGAGCAACA GCGACCATAC GCCCAATCCG GGCATCGAAA CCAAGAACGA CCAGGACCAG
AAGCAGTTCA CGCAGGAATT CCAGCTGCTG GGTAAGACCG GCTCGCTCGA TTGGGTGCTC
GGCGCCTTCT ACATGCACGA GACCGGGGAC GCGCTGAACG TCGTCGCCTT TCCGCAGGTG
ATCTTCCGGT CGGGTGGCGG CTTCAAGACC GATGCGATCG CCGGTTTCGC GCAGGGAACC
TACCGGATCA CGCCGGCGCT CAACCTGACC CTCGGCCTGC GCTACACCGA CGAACGCAAG
AAGTACGACA CGCTCGCCAA CCAGCAGATC ATCGGTGTCA TCGCCGATCC GGTGTCGCGG
ACCTTCGTCG ACTTGCGCGC GACGCCGATC CCGTTCGTGA CCGGCAGCAC CCCGAACCTC
GCGTTCACCG AGTTCACGCC GCACGCCAAC CTGTCCTACG ACTGGTCGTC CGACCTGATG
ACCTATGTCT CCTATTCGCG CGGGTACAAG AGCGGCGGCT ACGAACAGCG GCTGGCGCCG
GGAACGCCGA CCATTCCCTC CTTCCGGCCC GAATATGTCG ATTCCTACGA GGCCGGGCTG
AAGGCCACCG CCTTCGACCG CAGCCTGACG ATCAGCGCCG CCGCCTTCCA TGCCAAATAT
AAGGACCTGC AGATCTCGGT GGTCGACGGC CCCGCGCCGA CGCTCACCAA CGGCGGCGAC
GCCACCCTGA ACGGCGCCGA GCTCGAACTG GGCTGGCGCC CGGTCCGCGG CGTCACGCTC
ACCGGCTTCG CCAGCTATCT CGACGCCGGC TACGACCGGC TGACCCCGCG CGCGATCGTC
TCGGGCATCC GCCTCGGCAG CCGGTTGCCC AGCACCTCGC GTTGGCAATT CGGCGGTTCG
GCCGGCTTCG ACGTTCCGCT GACCGGCAGC CTGTCGCTGC GGCCCAATGT CGACTGGTCC
TATCGCTCGG CCCAATATCT CGACAGCGCC AACGAACGCG TGCTGCGGCA AAAGGGCTAT
ACGCTGGTGA ACGGCGCGCT GACGCTGGCG TCGACGGCCG GCTGGTCGGT CTCGCTGTCC
GGCCGCAACC TGCTCGACAG GACCTATCTC GTCTCGGGGC TCGCCCAATA CAACATCGGC
GAGATCGAGG GCCAATATGC CCGGCCGCGC GAATGGGCGC TGGGCTTCAA ATATCAGTTC
TGA
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| Protein sequence | MADRSNRVAI IALALSGAAF FGGVPAVAAT ADAGVQAEPE GADIIVTARR REETLQSVPI
AVSAISAATL ERRQIDSVAQ VGEAIPNMTY QTGAPTGTGA STPSVFIRGI GSAETSLGTE
PGVGLYVDDV YIARSVGSVL DLVSVDSVQV LRGPQGTLFG RNSLGGAILI RSRRPADRLS
GSVELKTGRY DRADIRASLD VPLSDTLRTS LSGMRERRDG YVRNLDGDKA NGNIHREAAR
FVAEWQASDM LKIDVNADMT RIRESAPPSV LLGLVPTIPG TPVPSSIQEI SNLQAGCFGG
SVLADSGNPR CIDQGAILGP FRTLGGYSTD NAIFDSQGSR PFGNASRIDI RGVSGRLEWT
LSPELSFKSI TAYRTLDAFW TSNSDHTPNP GIETKNDQDQ KQFTQEFQLL GKTGSLDWVL
GAFYMHETGD ALNVVAFPQV IFRSGGGFKT DAIAGFAQGT YRITPALNLT LGLRYTDERK
KYDTLANQQI IGVIADPVSR TFVDLRATPI PFVTGSTPNL AFTEFTPHAN LSYDWSSDLM
TYVSYSRGYK SGGYEQRLAP GTPTIPSFRP EYVDSYEAGL KATAFDRSLT ISAAAFHAKY
KDLQISVVDG PAPTLTNGGD ATLNGAELEL GWRPVRGVTL TGFASYLDAG YDRLTPRAIV
SGIRLGSRLP STSRWQFGGS AGFDVPLTGS LSLRPNVDWS YRSAQYLDSA NERVLRQKGY
TLVNGALTLA STAGWSVSLS GRNLLDRTYL VSGLAQYNIG EIEGQYARPR EWALGFKYQF
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