| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0806 |
|---|
| Symbol | |
|---|
| ID | 5197424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 896506 |
|---|
| End bp | 896958 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640580350 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001261311 |
|---|
| Protein GI | 148553729 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCA TCGATCGTGA GATAATCCGC CTGCTGAAGC AGGACGCGCG CCGGCCCAAC
GCGCAGATCG CCGAGGTGGT CGGCCTGTCG CCGTCGGCCT GCCATCGGCG GATCAAGCTG
CTCGAACAGA GCGGGGCGAT CCGCGGCTAC ACCGTGCTGG TGGGCGCCGC CGAGGGCGAG
GACGGGCTCG CCAATTTCCT GATCCAGGTC ACGCTCGATC GCCAGACCGA GGATTATCTC
TCCCGCTTCG AACATGCCGT CCGCGAGGTG CCGGGAATCC GCGAATGCTT CCTGATGACG
GGCGGCGCCG ACTATTGGCT TCGCGTCGAG ACCGAGGGGG CGGCGGGCTA TGAGGAGATA
CACGGCCTCC TGTCGCGCCT TCCCGGCGTC GCCCGGATCA ATTCGAGCTT CGCGATGCGC
GACGCGCTGC GCCCCCGGCC GTCGCGCCGC TGA
|
|---|
| Protein sequence | MDGIDREIIR LLKQDARRPN AQIAEVVGLS PSACHRRIKL LEQSGAIRGY TVLVGAAEGE
DGLANFLIQV TLDRQTEDYL SRFEHAVREV PGIRECFLMT GGADYWLRVE TEGAAGYEEI
HGLLSRLPGV ARINSSFAMR DALRPRPSRR
|
|---|
| |