Gene Swit_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0734 
Symbol 
ID5199010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp815091 
End bp816446 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content73% 
IMG OID640580278 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001261239 
Protein GI148553657 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0177457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0970899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG ACGCGCTCGC CGCCATCGTC GGCGCCGGCA ACGCCTTCGG GCCCGACGCG 
GTCGAGCCCC GCTATCTCGA CGACGAGACC GGCGGCGCGG CGGGGCGACC CGTCGGGCTG
GTCCGCCCCG CCGGGGTCGA GCAGGTCGCG GCGGTGCTGC GGCATTGCCA TGCCGCCGGC
CAGCCGGTCG TCGTCCAGGG CGGCCGCACC GGCATGACGC GCGGCGGCCT GCCGCGCGAC
GGCGAGCTGA TCCTGTCGCT CGAACGCATG GCCGCGATCG AGGCGATCGA CAGCGATGCC
GGGTTGATGA CGGTCGGGGC GGGCTGCGTG CTGGAGGTGG CGCAGCAGGC GGCGGCCGAC
GCAGGCTGGC GGCTGGCGGT CGACATCGGC GCGCGCGGAA GCTGCACGAT CGGCGGGATG
ATCGCGACTA ATGCCGGCGG CACCCAGGTG CTGCGCTACG GCATGATGCG CGACCAGGTG
CTGGGGCTGG AGGCGGTGCT CGCCGACGGG ACGATCATCT CGTCGCTCGG CGCGATGCTG
AAGAACAACA CCGGCTACGA CCTGAAGCAA TTCTTCATCG GATCGGAAGG GACGCTGGGG
ATCGTCACCC GCGCGGTGCT GCGGCTGCGC CCGCCCGCGA TCGGACGGCA GACCGCGCTT
TGCGCCGTCG CCGACTATGC CGCGGCGGTG CGGCTGCTGG CGCGGCTCGA ACGGGCGATG
CCGGGCCAGC TCTCGGCCTA TGAGCTGATG TGGAGCGATT TCTTCGGCGC CGCCTGCGTC
GCCAGCGGGC AGGGCTATCC GTTCGACGCG GCACACGAAC TGGTCGTCCT CGTCGAGACC
GAGAGCGGCG ACGACGAGGC GCTGGCGGCG GCGCTGGAGG AGAGCTTCGC CGACGGCACG
GTGCGCGACG CGCTGGTCGC CCGGTCGGAG CGCGACCACC AGCGCTTCTG GCGCTTCCGC
GACGCGGTCG GCGAGCTGGT CGGGGCGATG GCGATCGTCG AGCCGTTCGA CGTCAGCGCG
CCGATCGGCG CGATCGGCGG CCTCGTCACC GAACTGCGCG CGCGGCTGGC CAGTGAGGTG
CCGGGCAGCC GGCCGATCTG CTTCGGCCAT ATCGCCGACG GCAACCTCCA CCTCGCGCTC
GAACTGGCCG AGGAGGCGCA GCGGCCGGTG GCGGAGGCGA TCGTCTACGA CGCGGTGCGC
GCGGCCGGCG GATCGGTCTC GGCCGAGCAC GGCATCGGCA TCCTCAAGCG CGCCTGGCTC
GGCCATAGCC GCAGCGCCGC GGAAATCGCG ATGATGCGGA CGATCCGGGC GGCGCTCGAT
CCCAAGGGGA TATTGAACCG GGGCCGGATA TTCTAA
 
Protein sequence
MTIDALAAIV GAGNAFGPDA VEPRYLDDET GGAAGRPVGL VRPAGVEQVA AVLRHCHAAG 
QPVVVQGGRT GMTRGGLPRD GELILSLERM AAIEAIDSDA GLMTVGAGCV LEVAQQAAAD
AGWRLAVDIG ARGSCTIGGM IATNAGGTQV LRYGMMRDQV LGLEAVLADG TIISSLGAML
KNNTGYDLKQ FFIGSEGTLG IVTRAVLRLR PPAIGRQTAL CAVADYAAAV RLLARLERAM
PGQLSAYELM WSDFFGAACV ASGQGYPFDA AHELVVLVET ESGDDEALAA ALEESFADGT
VRDALVARSE RDHQRFWRFR DAVGELVGAM AIVEPFDVSA PIGAIGGLVT ELRARLASEV
PGSRPICFGH IADGNLHLAL ELAEEAQRPV AEAIVYDAVR AAGGSVSAEH GIGILKRAWL
GHSRSAAEIA MMRTIRAALD PKGILNRGRI F