| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0615 |
|---|
| Symbol | |
|---|
| ID | 5200709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 669353 |
|---|
| End bp | 669538 |
|---|
| Gene Length | 186 bp |
|---|
| Protein Length | 61 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640580159 |
|---|
| Product | Flp/Fap pilin component |
|---|
| Protein accession | YP_001261121 |
|---|
| Protein GI | 148553539 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3847] Flp pilus assembly protein, pilin Flp |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0603648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.95811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGG ATCGCCGTCA CGTGCCGTTC CGCGCCCTCG CCCGCGATTG CCGGGGTGCC
ACCGCCGTCG AATATGGCCT GATCCTCTCG CTGATCTTCA TGGCCATCAT GGGCGCGGTC
GCGAGCCTGG GCAGTTCGGT CCAGAGCCGC TGGAACGACA TCGCCGAGCG CGTCACCTCG
ATCTGA
|
|---|
| Protein sequence | MGKDRRHVPF RALARDCRGA TAVEYGLILS LIFMAIMGAV ASLGSSVQSR WNDIAERVTS
I
|
|---|
| |