| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0594 |
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| Symbol | tig |
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| ID | 5200799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 645996 |
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| End bp | 647651 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580137 |
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| Product | trigger factor |
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| Protein accession | YP_001261100 |
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| Protein GI | 148553518 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.761218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTG TCGAAACGCT GAACGAGGGC CTCAAGCGCG CCTATACGGT GACGATCCCC
GCCAATGATG TCGCCCAGCG CGTCGAGGCC GAGATCAAGT CGATCGCGCC GCAGGTCCGC
ATGCCCGGCT TCCGCCCCGG CAAGGTGCCC GCCAACCTGA TCAAGAAGAT GCATGGCCCG
GCGATCGAGC AGGACGTGCT CAACAAGACC GTGCAGGACG GCGTCCAGCA GCTCCTCGCC
GAGCAGAAGC TGCGTCCCGC GATGCAGCCC TCGGTCGAGC TGGTCGGCGG CGACTATGAG
CCCGGCAAGG ACGTGGCGCT CAAGGTCGAG CTCGAAGTGC TCCCCGACGT GCCGCCGCCC
GCGATCGAAG GCCTCAAGCT GGAGCGCCTG AGCGTCGAGG CCCCGACCGA CGAGATCGAC
GCGCAGATCA AGCGCATCGC CGACCAGCAG AAGCGCTATG ACGACGCCAA GGACGGCCAC
CCCGCGGTCG AGGGCGACCT CGTCGTGCTC GATTTCGCCG GCAGCGTCGA CGGCGTCGCC
TTCGAGGGCG GCACCGGCAC CGGCATGTCG GTCGAGCTTG GCTCGGGCCG CCTGATCCCC
GGTTTCGAGG ACCAGCTCGA AGGCATCAAG AAGGGCGAAT CGCGCAGCCT GAACGTCACC
TTCCCGAAGG ATTATGGCGA GAAGTCGCTG GCCGGTAAGG CCGCCGTCTT CGAAGTCACC
GCCACCGACG TCCGCGTCCC CGGCGAGACC AAGGTCGACG ACGAGTTCGC GCAGTCGCTG
GGCCTGCAGG GCCTCGACCA GCTTCGCGAG CTGATCAAGG GCCAGGTCGA GCAGGAGCTC
AACGGCCTGA CCCGCACCCA TATGAAGCGC AAGCTGCTCG ACCAGCTCGC CGCCGGCCAC
GACTTCCCGG TCCCGCCGTC GATGGTCGAG GCCGAGTTCG GCCAGATCTG GGCGCAGCTC
GAGCATGAGG CGACCCACGA GGAGGACCCC GAGGCCGCCC GCGCCGAGAT GGAGAAGGAC
CGCGACGATT ATCGCGCGAT CGCCGAGCGC CGCGTCCGCC TGGGCCTGCT GCTGTCCGAG
ATCGGCCAGC AGAACGGCGT CGAGGTGAGC GCGCAGGAGA TGCAGCGCCT CGTCCAGCAG
GCGGCGATGC AGTATCAGCC CGCCGACCGC GACCGCTTCG TCCAGTATCT GCAGCAGGAC
CCGATGGCCG CGGCGCAGCT CCGCGCGCCG CTCTATGAGG ACAAGGTCGT CGACTTCCTG
TTCGACAAGG CCGAGGTCAG CGACCGCACC GTCACCCGCG ACGAGCTGGA AGCCGCGATC
GAGGCCGACG ACGACACGAT CGGCAAGGGC CATGTCCATG GCCCGGGCTG CGGTCATGAC
CACCATGATC ACGACCACGA CCATGATCAT GCCGCTCCGG CCAAGAAGCC GGCCGCGAAG
AAGGCCGCTG CCAAGCCGGC CGCCGAGGAG GCTCCTGCCG CCGAGGACAA GCCGGCTGCC
AAGAAGAAGG CCGCGGTGAA GACCGAGGAA GCCGCCGAGG CCGCTCCGGC GCCGAAGAAG
GCCCCGGCCA AGAAGGCCGC CGCCGCCAAG GCCGAGGAGG CTCCTGCCGC CGCGCCGAAG
AAGGCTCCGG CCAAGAAGAA GGCCGCCGCC GAGTAA
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| Protein sequence | MQTVETLNEG LKRAYTVTIP ANDVAQRVEA EIKSIAPQVR MPGFRPGKVP ANLIKKMHGP
AIEQDVLNKT VQDGVQQLLA EQKLRPAMQP SVELVGGDYE PGKDVALKVE LEVLPDVPPP
AIEGLKLERL SVEAPTDEID AQIKRIADQQ KRYDDAKDGH PAVEGDLVVL DFAGSVDGVA
FEGGTGTGMS VELGSGRLIP GFEDQLEGIK KGESRSLNVT FPKDYGEKSL AGKAAVFEVT
ATDVRVPGET KVDDEFAQSL GLQGLDQLRE LIKGQVEQEL NGLTRTHMKR KLLDQLAAGH
DFPVPPSMVE AEFGQIWAQL EHEATHEEDP EAARAEMEKD RDDYRAIAER RVRLGLLLSE
IGQQNGVEVS AQEMQRLVQQ AAMQYQPADR DRFVQYLQQD PMAAAQLRAP LYEDKVVDFL
FDKAEVSDRT VTRDELEAAI EADDDTIGKG HVHGPGCGHD HHDHDHDHDH AAPAKKPAAK
KAAAKPAAEE APAAEDKPAA KKKAAVKTEE AAEAAPAPKK APAKKAAAAK AEEAPAAAPK
KAPAKKKAAA E
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