| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0575 |
|---|
| Symbol | |
|---|
| ID | 5200587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 625896 |
|---|
| End bp | 626360 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640580118 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001261081 |
|---|
| Protein GI | 148553499 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5317] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.251569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAAG GACCGAAAGA GATTCGCCTG CGGGGACGGC TGGTCAACAG CCTCTACACC
GAAGCGATGC TGCTCGCCGA CGAGGCGCGC GGCTATTTCG AGCATCGTGG GCGCGACGAC
CGCGAGGCGC TCGATCCGCT CGCCCGCGTC ACGCTGAGCT GCGAATCGCT CAAGGTCACG
AGCCGGTTGA TGCACGTCCT CGCCTGGCTG CTGACCGAAC GGGCGATCGA ACTGGGCCAG
ATGAGCGACG AGGAAGCCGC CGCCGCCGCC CGCCGGCTTG GGGATGCGAC GCCCAGCGAC
GCGATCTCGA CCGCCGGCCT GCCGCCCGCC GCGATCGCGC TGATCGACGC CAGCCAGGAT
CTCTATGCCC GCGTCCGGCG ACTGGAGGTC GAGCCGCCGG TCGACGTGGC GCCGGCCGCC
AGCCCGGCGC TCAGCCTGCT CGACCGGCTC GAAAAGGCGT TCTGA
|
|---|
| Protein sequence | MGEGPKEIRL RGRLVNSLYT EAMLLADEAR GYFEHRGRDD REALDPLARV TLSCESLKVT
SRLMHVLAWL LTERAIELGQ MSDEEAAAAA RRLGDATPSD AISTAGLPPA AIALIDASQD
LYARVRRLEV EPPVDVAPAA SPALSLLDRL EKAF
|
|---|
| |